RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 SPDYCQ5MJ68 293 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 DENND5AQ6IQ26 1287 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 ERAP2Q6P179 960 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 NEK5Q6P3R8 708 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 RANBP10Q6VN20 620 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 CEP68Q76N32 757 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 TSPAN33Q86UF1 283 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 HORMAD1Q86X24 394 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 GRK7Q8WTQ7 553 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 IFT43Q96FT9 208 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 IRF2BPLQ9H1B7 796 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 RAB6BQ9NRW1 208 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 GON4LQ3T8J9 2241 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 DOCK9Q9BZ29 2069 aa18.07■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3DA0A087WVF3 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3IA0A087WXS9 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3EA0A087X179 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3KA0A087X1G2 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3FA6NER0 549 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3LB9A6J9 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 MAP3K13O43283 966 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 AP2A1O95782 977 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3HP0C7X1 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 VIPR1P32241 457 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 ACTN2P35609 894 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 HNF1BP35680 557 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 PLA2G5P39877 138 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 VPS41P49754 854 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 CCR5P51681 352 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 EPHB1P54762 984 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 CKAP4Q07065 602 aaKnown RBP18.06■□□□□ 0.48
COMMD4-222ENST00000568034 SLC1A5Q15758 541 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 CNGA3Q16281 694 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 SYCP2LQ5T4T6 812 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3GQ6DHY5 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3CQ6IPX1 549 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 KIAA1161Q6NSJ0 714 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 USP45Q70EL2 814 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 ARMCX6Q7L4S7 300 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 LPCAT2Q7L5N7 544 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TBC1D3Q8IZP1 549 aaPredicted RBP18.06■□□□□ 0.48
COMMD4-222ENST00000568034 PAF1Q8N7H5 531 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 PDCD7Q8N8D1 485 aaKnown RBP18.06■□□□□ 0.48
COMMD4-222ENST00000568034 BIRC7Q96CA5 298 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 FAM122AQ96E09 287 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 HSPA12BQ96MM6 686 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 KRT12Q99456 494 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 APOL2Q9BQE5 337 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 ADGRE3Q9BY15 652 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 SLCO1B1Q9Y6L6 691 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 TRPM6Q9BX84 2022 aa18.06■□□□□ 0.48
COMMD4-222ENST00000568034 MMP20O60882 483 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 USP12O75317 370 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 SUN1O94901 812 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 HEXIM1O94992 359 aaKnown RBP18.05■□□□□ 0.48
COMMD4-222ENST00000568034 PCDH8O95206 1070 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 HLA-DPA1P20036 260 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 FAM193AP78312 1265 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 MSLNQ13421 630 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-222ENST00000568034 PTK6Q13882 451 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 TUBB2AQ13885 445 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 ELF2Q15723 593 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 LPAL2Q16609 132 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 CRTC1Q6UUV9 634 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 C4orf22Q6V702 233 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 LIPIQ6XZB0 460 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 PRR23BQ6ZRT6 265 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 CBARPQ8N350 705 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-222ENST00000568034 SLC25A41Q8N5S1 370 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 SUMF1Q8NBK3 374 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 DNASE2BQ8WZ79 361 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 FOXJ1Q92949 421 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 RMDN1Q96DB5 314 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 RUNDC3BQ96NL0 473 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 TBL1YQ9BQ87 522 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 WRAP53Q9BUR4 548 aaKnown RBP18.05■□□□□ 0.48
COMMD4-222ENST00000568034 TUBB2BQ9BVA1 445 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 FSD1LQ9BXM9 530 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 LRRC40Q9H9A6 602 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 FEZ2Q9UHY8 353 aaPredicted RBP18.05■□□□□ 0.48
COMMD4-222ENST00000568034 SMG5Q9UPR3 1016 aaKnown RBP18.05■□□□□ 0.48
COMMD4-222ENST00000568034 SPO11Q9Y5K1 396 aa18.05■□□□□ 0.48
COMMD4-222ENST00000568034 TCRBV7S3A2A0A539 114 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 IGLON5A6NGN9 336 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 A8MX80 341 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 NEMP1O14524 444 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 TTI1O43156 1089 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 RHOBTB1O94844 696 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 FSBPO95073 299 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 GAS8O95995 478 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 FGF1P05230 155 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 PIRTP0C851 137 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 CYP2A6P11509 494 aaPredicted RBP18.04■□□□□ 0.48
COMMD4-222ENST00000568034 C6P13671 934 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 MAT2AP31153 395 aaKnown RBP18.04■□□□□ 0.48
COMMD4-222ENST00000568034 MAGEA6P43360 314 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 LIG3P49916 1009 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 RPS21P63220 83 aaKnown RBP18.04■□□□□ 0.48
COMMD4-222ENST00000568034 DR1Q01658 176 aa18.04■□□□□ 0.48
COMMD4-222ENST00000568034 GPS1Q13098 491 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms