RNA–Protein interactions for RNA: ENST00000565379.1

NME3-208, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 911 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-208ENST00000565379 PCYOX1Q9UHG3 505 aa26.12■■□□□ 1.77
NME3-208ENST00000565379 RPL26L1Q9UNX3 145 aaKnown RBP26.12■■□□□ 1.77
NME3-208ENST00000565379 RAI2Q9Y5P3 530 aa26.12■■□□□ 1.77
NME3-208ENST00000565379 MEI4A8MW99 385 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 PSMD3O43242 534 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 RNASEH2AO75792 299 aaKnown RBP26.11■■□□□ 1.77
NME3-208ENST00000565379 MMP2P08253 660 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 ACSL1P33121 698 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 HOXD12P35452 270 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 FDFT1P37268 417 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 TNNT3P45378 269 aaPredicted RBP26.11■■□□□ 1.77
NME3-208ENST00000565379 GEMP55040 296 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 ARMC12Q5T9G4 340 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 TTC27Q6P3X3 843 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 FBXL19Q6PCT2 694 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 PRPF39Q86UA1 669 aaKnown RBP26.11■■□□□ 1.77
NME3-208ENST00000565379 ZCCHC9Q8N567 271 aaKnown RBP26.11■■□□□ 1.77
NME3-208ENST00000565379 PAF1Q8N7H5 531 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 DEFB124Q8NES8 71 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 CCHCR1Q8TD31 782 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 ARRDC3Q96B67 414 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 TDRD1Q9BXT4 1180 aaKnown RBP26.11■■□□□ 1.77
NME3-208ENST00000565379 SGK2Q9HBY8 427 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 PCDHGC4Q9Y5F7 938 aa26.11■■□□□ 1.77
NME3-208ENST00000565379 A0A1W2PP55 124 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 TTC24A2A3L6 582 aaPredicted RBP26.1■■□□□ 1.77
NME3-208ENST00000565379 C16orf96A6NNT2 1141 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 GJB3O75712 270 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 ECEL1O95672 775 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 CEACAM1P13688 526 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 CSRP1P21291 193 aaKnown RBP26.1■■□□□ 1.77
NME3-208ENST00000565379 DRD3P35462 400 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 SYDE1Q6ZW31 735 aaPredicted RBP26.1■■□□□ 1.77
NME3-208ENST00000565379 AADATQ8N5Z0 425 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 MNS1Q8NEH6 495 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 SPATA4Q8NEY3 305 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 CEP76Q8TAP6 659 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 RBM15Q96T37 977 aaKnown RBP eCLIP26.1■■□□□ 1.77
NME3-208ENST00000565379 ADGRE3Q9BY15 652 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 MIR1-1HGQ9H1L0 117 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 KDM4CQ9H3R0 1056 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 C6orf106Q9H6K1 298 aaPredicted RBP26.1■■□□□ 1.77
NME3-208ENST00000565379 PCDH9Q9HC56 1237 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 MRFAP1Q9Y605 127 aa26.1■■□□□ 1.77
NME3-208ENST00000565379 PGLSO95336 258 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 EPOP01588 193 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 XPAP23025 273 aaPredicted RBP26.09■■□□□ 1.77
NME3-208ENST00000565379 DPP6P42658 865 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 CNTN1Q12860 1018 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 TRAF2Q12933 501 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 MINDY1Q8N5J2 469 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.09■■□□□ 1.77
NME3-208ENST00000565379 FOXJ1Q92949 421 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 BTBD1Q9H0C5 482 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 DDX47Q9H0S4 455 aaKnown RBP26.09■■□□□ 1.77
NME3-208ENST00000565379 SERGEFQ9UGK8 458 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 PHTF1Q9UMS5 762 aa26.09■■□□□ 1.77
NME3-208ENST00000565379 ERI2A8K979 691 aaKnown RBP26.08■■□□□ 1.77
NME3-208ENST00000565379 FZD6O60353 706 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 ADRB3P13945 408 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 PSMB4P28070 264 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 CCDC70Q6NSX1 233 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP26.08■■□□□ 1.77
NME3-208ENST00000565379 PARS2Q7L3T8 475 aaKnown RBP26.08■■□□□ 1.77
NME3-208ENST00000565379 TTC7BQ86TV6 843 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 KLHDC8BQ8IXV7 354 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 DNASE2BQ8WZ79 361 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 IFT43Q96FT9 208 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 NSMCE3Q96MG7 304 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 NEUROG2Q9H2A3 272 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 EIF2B4Q9UI10 523 aaKnown RBP26.08■■□□□ 1.77
NME3-208ENST00000565379 TPX2Q9ULW0 747 aaKnown RBP26.08■■□□□ 1.77
NME3-208ENST00000565379 PCDHB9Q9Y5E1 797 aa26.08■■□□□ 1.77
NME3-208ENST00000565379 PCNX2A6NKB5 2137 aa26.08■■□□□ 1.76
NME3-208ENST00000565379 METTL12A8MUP2 240 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 ARHGAP33O14559 1287 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 AP1G1O43747 822 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 MT-CYBP00156 380 aaPredicted RBP26.07■■□□□ 1.76
NME3-208ENST00000565379 CPP00450 1065 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 KRT14P02533 472 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 BNC1Q01954 994 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 CDK18Q07002 472 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 ELP6Q0PNE2 266 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 DHX34Q14147 1143 aaKnown RBP26.07■■□□□ 1.76
NME3-208ENST00000565379 UGP2Q16851 508 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 POM121L1PQ3SYA9 428 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 WDR45BQ5MNZ6 344 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 SYCP2LQ5T4T6 812 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 PIP5KL1Q5T9C9 394 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 AGBL4Q5VU57 503 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 ERAP2Q6P179 960 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 SPATA22Q8NHS9 363 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 PDCD6IPQ8WUM4 868 aaKnown RBP26.07■■□□□ 1.76
NME3-208ENST00000565379 FEM1CQ96JP0 617 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 PCED1AQ9H1Q7 454 aa26.07■■□□□ 1.76
NME3-208ENST00000565379 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.06■■□□□ 1.76
NME3-208ENST00000565379 UPK3BL1B0FP48 263 aa26.06■■□□□ 1.76
NME3-208ENST00000565379 UPK3BL2E5RIL1 263 aa26.06■■□□□ 1.76
NME3-208ENST00000565379 PLRG1O43660 514 aaKnown RBP26.06■■□□□ 1.76
NME3-208ENST00000565379 METTL18O95568 372 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms