RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 BMFQ96LC9 184 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 CDC6Q99741 560 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 PRR14Q9BWN1 585 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 MAK16Q9BXY0 300 aaKnown RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 POLR1EQ9GZS1 481 aaKnown RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 NOD2Q9HC29 1040 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 SALL4Q9UJQ4 1053 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 BTBD3Q9Y2F9 522 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 PCDHB9Q9Y5E1 797 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 HEY1Q9Y5J3 304 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 ARID1BQ8NFD5 2236 aaPredicted RBP11.61□□□□□ -0.55
SLIRP-205ENST00000556310 ACACBO00763 2458 aa11.61□□□□□ -0.55
SLIRP-205ENST00000556310 LRP4O75096 1905 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 TTC24A2A3L6 582 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-205ENST00000556310 PPP1R12AO14974 1030 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-205ENST00000556310 PJA2O43164 708 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 NEBLO76041 1014 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 PRKCGP05129 697 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 ITGAVP06756 1048 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 CCNB1P14635 433 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 NFKBIAP25963 317 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 IGFALSP35858 605 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 CDKN2BP42772 138 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 MARCKSL1P49006 195 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 PFN3P60673 137 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 TRAF2Q12933 501 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 RALGDSQ12967 914 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 AGERQ15109 404 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 PDK1Q15118 436 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 Q6ZSR6 202 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 DPPA4Q7L190 304 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 DAAM2Q86T65 1068 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 GATAD2AQ86YP4 633 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 RFX6Q8HWS3 928 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 TXLNBQ8N3L3 684 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 TP53I13Q8NBR0 393 aaPredicted RBP11.6□□□□□ -0.55
SLIRP-205ENST00000556310 CCNYQ8ND76 341 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 RHBDD1Q8TEB9 315 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 CENPTQ96BT3 561 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 IFT43Q96FT9 208 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 OLFM3Q96PB7 478 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 SEMA3CQ99985 751 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 RBM22Q9NW64 420 aaKnown RBP eCLIP11.6□□□□□ -0.557e-6■■■□□ 17.4
SLIRP-205ENST00000556310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
SLIRP-205ENST00000556310 PCDHGC4Q9Y5F7 938 aa11.6□□□□□ -0.55
SLIRP-205ENST00000556310 TPRP12270 2363 aaKnown RBP11.6□□□□□ -0.55
SLIRP-205ENST00000556310 TOR1BO14657 336 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 PGLSO95336 258 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 HLA-DQB2P05538 268 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 ELFN1P0C7U0 828 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 CES1P23141 567 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 LIG3P49916 1009 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 GSDMDP57764 484 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 DYNLT1P63172 113 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 IFI35P80217 286 aaPredicted RBP11.59□□□□□ -0.55
SLIRP-205ENST00000556310 SHC2P98077 582 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 TFDP2Q14188 446 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 LRRC14Q15048 493 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 IRF4Q15306 451 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 TFDP3Q5H9I0 405 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 ARMC12Q5T9G4 340 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 SPOCD1Q6ZMY3 1216 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 KANSL1Q7Z3B3 1105 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 KIAA1328Q86T90 577 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 PARGQ86W56 976 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 EXD1Q8NHP7 514 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 PDCD6IPQ8WUM4 868 aaKnown RBP11.59□□□□□ -0.55
SLIRP-205ENST00000556310 RBM41Q96IZ5 413 aaKnown RBP11.59□□□□□ -0.55
SLIRP-205ENST00000556310 LGMNQ99538 433 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 LACRTQ9GZZ8 138 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 BRD8Q9H0E9 1235 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 ANGPTL2Q9UKU9 493 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 PHTF1Q9UMS5 762 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 COQ6Q9Y2Z9 468 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 TTLL3Q9Y4R7 772 aa11.59□□□□□ -0.55
SLIRP-205ENST00000556310 hCG_1818297A0A087WSY0 165 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 SPTY2D1-AS1A0A0U1RR47 76 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 KCNK1O00180 336 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 LZTS3O60299 673 aaPredicted RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 FZD6O60353 706 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 ZRANB2O95218 330 aaKnown RBP eCLIP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 TRIM16O95361 564 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 FTH1P19P0C7X4 201 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 NME1P15531 152 aaKnown RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 TGM2P21980 687 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 CA4P22748 312 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 VIPR1P32241 457 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 CTNNA1P35221 906 aaKnown RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 NR2C2P49116 596 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 THOP1P52888 689 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 NAP1L1P55209 391 aaKnown RBP11.58□□□□□ -0.56
SLIRP-205ENST00000556310 YPEL5P62699 121 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 SEMG2Q02383 582 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 DSC2Q02487 901 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 GUCA2AQ02747 115 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 ITKQ08881 620 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 FOXC1Q12948 553 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 BNIP3Q12983 259 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 ZBTB17Q13105 803 aa11.58□□□□□ -0.56
SLIRP-205ENST00000556310 PDE1CQ14123 709 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms