RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 GOLGA6CA6NDK9 693 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 GOLGA6BA6NDN3 693 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 UPK3BL1B0FP48 263 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 UPK3BL2E5RIL1 263 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 PPFIA2O75334 1257 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 ERLIN1O75477 346 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 GJB3O75712 270 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 CPP00450 1065 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 GOLGA6DP0CG33 693 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 ACSL1P33121 698 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 CD86P42081 329 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 DHPSP49366 369 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 METAP1P53582 386 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 EPHB1P54762 984 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 NHLH1Q02575 133 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 HLTFQ14527 1009 aaKnown RBP eCLIP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 IHHQ14623 411 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 PLK5Q496M5 336 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 WDR45BQ5MNZ6 344 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 SYCP2LQ5T4T6 812 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 LYSMD4Q5XG99 296 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 PMS2CLQ68D20 193 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 LAIR1Q6GTX8 287 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 NEK5Q6P3R8 708 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 PID1Q7Z2X4 250 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 TTC7BQ86TV6 843 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 KLHDC8BQ8IXV7 354 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 AGGF1Q8N302 714 aaeCLIP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 TAB3Q8N5C8 712 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 CCHCR1Q8TD31 782 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 FAM131CQ96AQ9 280 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 IMP4Q96G21 291 aaKnown RBP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 ZC3H10Q96K80 434 aaKnown RBP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 HSPA12BQ96MM6 686 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 ADGRE3Q9BY15 652 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 FAM129AQ9BZQ8 928 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 DUSP15Q9H1R2 295 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 GBA3Q9H227 469 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 GLOD4Q9HC38 313 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 CD93Q9NPY3 652 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 VPS45Q9NRW7 570 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 FAM86C1Q9NVL1 165 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 ARGLU1Q9NWB6 273 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 GOLGA6AQ9NYA3 693 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 PAK5Q9P286 719 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 MBD1Q9UIS9 605 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-218ENST00000555213 GMEB2Q9UKD1 530 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 RAI2Q9Y5P3 530 aa10.98□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3DA0A087WVF3 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3IA0A087WXS9 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3EA0A087X179 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3KA0A087X1G2 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TTC24A2A3L6 582 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3FA6NER0 549 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-218ENST00000555213 PRR23AA6NEV1 266 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3LB9A6J9 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 AGPSO00116 658 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 PLK4O00444 970 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 HTRA2O43464 458 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-218ENST00000555213 ATP8B1O43520 1251 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TSPAN6O43657 245 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 AP1G1O43747 822 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 ANXA9O76027 345 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TMEM63AO94886 807 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 PCDH8O95206 1070 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 PGLSO95336 258 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3HP0C7X1 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 NFKB1P19838 968 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 NUDT1P36639 197 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 RPL26P61254 145 aaKnown RBP10.97□□□□□ -0.65
SHMT2-218ENST00000555213 CAV1Q03135 178 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TRAF2Q12933 501 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 CASP8Q14790 479 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 MORF4L2Q15014 288 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 UGP2Q16851 508 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 MSS51Q4VC12 460 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 FNBP1LQ5T0N5 605 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 FAXCQ5TGI0 409 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 KIAA0895LQ68EN5 471 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3GQ6DHY5 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3CQ6IPX1 549 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 KIAA1161Q6NSJ0 714 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 USP45Q70EL2 814 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 ARMCX6Q7L4S7 300 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 CYP2U1Q7Z449 544 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TMC3Q7Z5M5 1100 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TMEFF1Q8IYR6 380 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TBC1D3Q8IZP1 549 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-218ENST00000555213 BBOF1Q8ND07 529 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 ARRDC2Q8TBH0 407 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 SNX19Q92543 992 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 SPOCK2Q92563 424 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 ECHDC3Q96DC8 303 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 IFT43Q96FT9 208 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 LOXL4Q96JB6 756 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 FSD1LQ9BXM9 530 aa10.97□□□□□ -0.65
SHMT2-218ENST00000555213 TDRD1Q9BXT4 1180 aaKnown RBP10.97□□□□□ -0.65
SHMT2-218ENST00000555213 RPL26L1Q9UNX3 145 aaKnown RBP10.97□□□□□ -0.65
SHMT2-218ENST00000555213 AAR2Q9Y312 384 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms