RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 ELF3P78545 371 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 MEF2AQ02078 507 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 NHLH1Q02575 133 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PPIL2Q13356 520 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ITGA9Q13797 1035 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF268Q14587 947 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SHHQ15465 462 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CCNJQ5T5M9 372 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 INTS11Q5TA45 600 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 VWA5B1Q5TIE3 1220 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 C12orf60Q5U649 245 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 BROXQ5VW32 411 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ALS2CLQ60I27 953 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CNSTQ6PJW8 725 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 Q6ZNX1 250 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PLEKHM3Q6ZWE6 761 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ITIH5Q86UX2 942 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF677Q86XU0 584 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 STX12Q86Y82 276 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ERO1BQ86YB8 467 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 LRRC8AQ8IWT6 810 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CD302Q8IX05 232 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SYNPOQ8N3V7 929 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CCDC63Q8NA47 563 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ATAD1Q8NBU5 361 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 REPS2Q8NFH8 660 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 TTLQ8NG68 377 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 OR56A1Q8NGH5 318 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 GOT1L1Q8NHS2 421 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 RUFY2Q8WXA3 655 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SEPT1Q8WYJ6 367 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ABTB1Q969K4 478 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 TTC17Q96AE7 1141 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF274Q96GC6 653 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 GBP5Q96PP8 586 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CTRCQ99895 268 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SH3GL2Q99962 352 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SELENOSQ9BQE4 189 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CCDC77Q9BR77 488 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CENPKQ9BS16 269 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 TARS2Q9BW92 718 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CALN1Q9BXU9 219 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CRNKL1Q9BZJ0 848 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 NT5C3AQ9H0P0 336 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PLEKHA4Q9H4M7 779 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CAAP1Q9H8G2 361 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 NTN4Q9HB63 628 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CRLF2Q9HC73 371 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PLCB1Q9NQ66 1216 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PAG1Q9NWQ8 432 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PAQR5Q9NXK6 330 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 ARHGEF38Q9NXL2 777 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 IL37Q9NZH6 218 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 TESQ9UGI8 421 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 SH3BGRL2Q9UJC5 107 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 OGDHLQ9ULD0 1010 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 COG5Q9UP83 839 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 HBS1LQ9Y450 684 aaKnown RBP4.51□□□□□ -1.69
ATXN3-227ENST00000554491 AFG3L2Q9Y4W6 797 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PCDHAC2Q9Y5I4 1007 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CDY2AQ9Y6F7 541 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 PKD1L2Q7Z442 2459 aa4.51□□□□□ -1.69
ATXN3-227ENST00000554491 CACNA1GO43497 2377 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 MAST3O60307 1309 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 SPTBN4Q9H254 2564 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 A0A1B0GVL5 298 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 A0A1W2PQ67 120 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 SLC9B1P1A6NJY1 282 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 TSPY2A6NKD2 308 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 MIF4GDA9UHW6 222 aaKnown RBP4.5□□□□□ -1.69
ATXN3-227ENST00000554491 STMND1H3BQB6 276 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 UBXN8O00124 270 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 FBP2O00757 339 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 MGST3O14880 152 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 BET1O15155 118 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 RAD51BO15315 384 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 PIP5K1CO60331 668 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 PLOD3O60568 738 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 PDE5AO76074 875 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 USP1O94782 785 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 KRT75O95678 551 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 IL33O95760 270 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 RPS17P08708 135 aaKnown RBP4.5□□□□□ -1.69
ATXN3-227ENST00000554491 KRT7P08729 469 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 HOXB7P09629 217 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 TSPY3P0CV98 308 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 TSPY8P0CW00 308 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 ACADSP16219 412 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 ARF4P18085 180 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-227ENST00000554491 ATP6V1C1P21283 382 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 JAK1P23458 1154 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 CTNNA2P26232 953 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 GALNSP34059 522 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 PHBP35232 272 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 LONP1P36776 959 aaKnown RBP4.5□□□□□ -1.69
ATXN3-227ENST00000554491 SLC26A3P40879 764 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 RXRGP48443 463 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 LSSP48449 732 aa4.5□□□□□ -1.69
ATXN3-227ENST00000554491 ZNF75DP51815 510 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms