RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 ITM2BQ9Y287 266 aa18.12■□□□□ 0.49
PSEN1-208ENST00000553719 SCN8AQ9UQD0 1980 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 HEXIM1O94992 359 aaKnown RBP18.11■□□□□ 0.49
PSEN1-208ENST00000553719 ALPIP09923 528 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 LHCGRP22888 699 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 OXTRP30559 389 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 ACSL1P33121 698 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 HNF1BP35680 557 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 MAGEA3P43357 314 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 FNTBP49356 437 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 SLC7A5Q01650 507 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 MORF4L2Q15014 288 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 ANGPT1Q15389 498 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 TRADDQ15628 312 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 TMEM52BQ4KMG9 183 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 PCGF5Q86SE9 256 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 CBARPQ8N350 705 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-208ENST00000553719 SLC25A41Q8N5S1 370 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 OR52K1Q8NGK4 314 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 TRIM31Q9BZY9 425 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 KDM4CQ9H3R0 1056 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 SGK2Q9HBY8 427 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 WHRNQ9P202 907 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 MBD1Q9UIS9 605 aaPredicted RBP18.11■□□□□ 0.49
PSEN1-208ENST00000553719 NCKAP1Q9Y2A7 1128 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 SNX24Q9Y343 169 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 UTP11Q9Y3A2 253 aaKnown RBP18.11■□□□□ 0.49
PSEN1-208ENST00000553719 SPO11Q9Y5K1 396 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 LRRK1Q38SD2 2015 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 USP34Q70CQ2 3546 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 DMDP11532 3685 aa18.11■□□□□ 0.49
PSEN1-208ENST00000553719 FANCMQ8IYD8 2048 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 SLU7O95391 586 aaKnown RBP18.1■□□□□ 0.49
PSEN1-208ENST00000553719 CTPS1P17812 591 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 CD6P30203 668 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 ITGA8P53708 1063 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 EPHB1P54762 984 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 CCDC15Q0P6D6 951 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 ELP6Q0PNE2 266 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 CDH17Q12864 832 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 ERAP2Q6P179 960 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 USP45Q70EL2 814 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 CAND1Q86VP6 1230 aaKnown RBP18.1■□□□□ 0.49
PSEN1-208ENST00000553719 FAM160A2Q8N612 972 aaPredicted RBP18.1■□□□□ 0.49
PSEN1-208ENST00000553719 RLN3Q8WXF3 142 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 RMDN1Q96DB5 314 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 BTBD1Q9H0C5 482 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 DPH5Q9H2P9 285 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 MAGEE1Q9HCI5 957 aa18.1■□□□□ 0.49
PSEN1-208ENST00000553719 SMAPO00193 183 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 TSPAN6O43657 245 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 SP9P0CG40 484 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 MLNP12872 115 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 GM2AP17900 193 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 VIPR1P32241 457 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 LMAN1P49257 510 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 TERF1P54274 439 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 CBLBQ13191 982 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 CNGA3Q16281 694 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 TMEM259Q4ZIN3 620 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 LRRC8BQ6P9F7 803 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 CRTC1Q6UUV9 634 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 ZDHHC24Q6UX98 284 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 TSPAN33Q86UF1 283 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 FAM124AQ86V42 546 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 ZBTB44Q8NCP5 570 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 GANCQ8TET4 914 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 EID2BQ96D98 161 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 TOE1Q96GM8 510 aaKnown RBP18.09■□□□□ 0.49
PSEN1-208ENST00000553719 SERPINB12Q96P63 405 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 PREBQ9HCU5 417 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 PIH1D1Q9NWS0 290 aaKnown RBP18.09■□□□□ 0.49
PSEN1-208ENST00000553719 CACNA1HO95180 2353 aa18.09■□□□□ 0.49
PSEN1-208ENST00000553719 BPTFQ12830 3046 aa18.08■□□□□ 0.49
PSEN1-208ENST00000553719 ESYT3A0FGR9 886 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 H0Y858 1186 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 PIRTP0C851 137 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 CYP2A6P11509 494 aaPredicted RBP18.08■□□□□ 0.48
PSEN1-208ENST00000553719 XPAP23025 273 aaPredicted RBP18.08■□□□□ 0.48
PSEN1-208ENST00000553719 NFKBIAP25963 317 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 FAM193AP78312 1265 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 SEMG2Q02383 582 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 CREB5Q02930 508 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 USP39Q53GS9 565 aaKnown RBP18.08■□□□□ 0.48
PSEN1-208ENST00000553719 LRRC66Q68CR7 880 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 CCDC70Q6NSX1 233 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 NEK5Q6P3R8 708 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 NDUFAF2Q8N183 169 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 AGGF1Q8N302 714 aaeCLIP18.08■□□□□ 0.48
PSEN1-208ENST00000553719 TTC30BQ8N4P2 665 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 BBOF1Q8ND07 529 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 OR2T34Q8NGX1 318 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 OR14C36Q8NHC7 312 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 ART4Q93070 314 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 XAB2Q9HCS7 855 aaKnown RBP18.08■□□□□ 0.48
PSEN1-208ENST00000553719 GDF3Q9NR23 364 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 ZDHHC18Q9NUE0 388 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 ZFR2Q9UPR6 939 aaKnown RBP18.08■□□□□ 0.48
PSEN1-208ENST00000553719 ZNF711Q9Y462 761 aa18.08■□□□□ 0.48
PSEN1-208ENST00000553719 A0A0U1RQS6 177 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms