RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SYCP2Q9BX26 1530 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 H3BMM5 538 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 PGLSO95336 258 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 CKMT2P17540 419 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 TGM4P49221 684 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 PRMT2P55345 433 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 SPAG16Q8N0X2 631 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 BOLLQ8N9W6 283 aaKnown RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 FBXO36Q8NEA4 188 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 CEP76Q8TAP6 659 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 RAET1EQ8TD07 263 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF496Q96IT1 587 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 PKP2Q99959 881 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 C11orf84Q9BUA3 381 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM126AQ9BYI3 521 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 GPR63Q9BZJ6 419 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 C14orf105Q9NVL8 296 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 IL37Q9NZH6 218 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 MED23Q9ULK4 1368 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 ENPP3O14638 875 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 APRTP07741 180 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 RORAP35398 523 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 CHRNEQ04844 493 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 FOXR2Q6PJQ5 311 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 MACC1Q6ZN28 852 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 TP53I13Q8NBR0 393 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 ING5Q8WYH8 240 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC5A5Q92911 643 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 JPH4Q96JJ6 628 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 MED28Q9H204 178 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 RSAD1Q9HA92 442 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 TMEM260Q9NX78 707 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 DNMT3AQ9Y6K1 912 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 AKAP5P24588 427 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 PIGFQ07326 219 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 PTRHD1Q6GMV3 140 aaKnown RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM83AQ86UY5 434 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 LINC00518Q8N0U6 118 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 CBR4Q8N4T8 237 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 PCSK9Q8NBP7 692 aaKnown RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 KCNH5Q8NCM2 988 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 ABHD11Q8NFV4 315 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 ELMO2Q96JJ3 720 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 NEDD4LQ96PU5 975 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 C8orf33Q9H7E9 229 aaPredicted RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 DDX43Q9NXZ2 648 aaKnown RBP9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 SPASTQ9UBP0 616 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 SALL4Q9UJQ4 1053 aa9.04□□□□□ -0.96
GTF2A1-203ENST00000553612 A0A1B0GV90 55 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 FAM240BA0A1B0GVZ2 78 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 H0YGN5 161 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 INPP4BO15327 924 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 RAB3AP20336 220 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 GTF2H3Q13889 308 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 TSNQ15631 228 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 HADHQ16836 314 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 MOXD1Q6UVY6 613 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 HIPK1Q86Z02 1210 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CELF2-AS1Q8N7Q2 184 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CLP1Q92989 425 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 BARD1Q99728 777 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 TRAF4Q9BUZ4 470 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 METTL8Q9H825 291 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 RASSF1Q9NS23 344 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 SLC22A11Q9NSA0 550 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 DAGLAQ9Y4D2 1042 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 NFS1Q9Y697 457 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 DNAJB6O75190 326 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 TSPAN19P0C672 248 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 NMT1P30419 496 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 BPIFB3P59826 476 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 TSTA3Q13630 321 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 MOGSQ13724 837 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 SNAPC1Q16533 368 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 DENND1BQ6P3S1 775 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 LRCH3Q96II8 777 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 IL12RB2Q99665 862 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 EVA1BQ9NVM1 165 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 MAPRE3Q9UPY8 281 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 MRPS23Q9Y3D9 190 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 TESMINQ9Y4I5 508 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF197O14709 1029 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CSDE1O75534 798 aaKnown RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 AP2S1P53680 142 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 PTENP60484 403 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ARF5P84085 180 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ACOX1Q15067 660 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ZNF792Q3KQV3 632 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 FLYWCH1Q4VC44 716 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 TCEAL6Q6IPX3 200 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 C8orf59Q8N0T1 100 aaPredicted RBP9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 SIMC1Q8NDZ2 872 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 ADAM32Q8TC27 787 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CLPBQ9H078 707 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 LAMP5Q9UJQ1 280 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CLEC4AQ9UMR7 237 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CORINQ9Y5Q5 1042 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 CYP4B1P13584 511 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 SMSP52788 366 aa9.03□□□□□ -0.96
GTF2A1-203ENST00000553612 RTP2Q5QGT7 225 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms