RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 TAF6P49848 677 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 KPNA2P52292 529 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 BCAT1P54687 386 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 BPIFB3P59826 476 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PSME3P61289 254 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 CRADDP78560 199 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 MRPL28Q13084 256 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 GK3PQ14409 553 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ZBED5Q49AG3 693 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 WDR45BQ5MNZ6 344 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 STRADAQ7RTN6 431 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 BNIPLQ7Z465 357 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 RNF169Q8NCN4 708 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ZNF420Q8TAQ5 688 aaPredicted RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 IPCEF1Q8WWN9 437 aaPredicted RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 TRIB2Q92519 343 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 LPPQ93052 612 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 BORCS5Q969J3 196 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ZNF669Q96BR6 464 aaPredicted RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 UPF3AQ9H1J1 476 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 CAAP1Q9H8G2 361 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 COQ10BQ9H8M1 238 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 LRRC4Q9HBW1 653 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 FANCFQ9NPI8 374 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ZNF358Q9NW07 568 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 FKBP14Q9NWM8 211 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ADA2Q9NZK5 511 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 CDH7Q9ULB5 785 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PCDHGB4Q9UN71 923 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 GABRQQ9UN88 632 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PCDHGB5Q9Y5G0 923 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 RAD54BQ9Y620 910 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PLXNA3P51805 1871 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 C2orf81A6NN90 581 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ACSL4O60488 711 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 NPHS1O60500 1241 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 CD4P01730 458 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 WARSP23381 471 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 EPHA3P29320 983 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 LRPAP1P30533 357 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 NDUFV1P49821 464 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 MGAT3Q09327 533 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 BSPRYQ5W0U4 402 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PDZD4Q76G19 769 aaPredicted RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 CTU1Q7Z7A3 348 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 TMEM135Q86UB9 458 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 LURAP1LQ8IV03 231 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PLD6Q8N2A8 252 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 PAF1Q8N7H5 531 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ANKFN1Q8N957 763 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 NETO2Q8NC67 525 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 B3GALNT2Q8NCR0 500 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 ADAMTS16Q8TE57 1224 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 TMA16Q96EY4 203 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 ZNF560Q96MR9 790 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PAAF1Q9BRP4 392 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 TRIM15Q9C019 465 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 AP5M1Q9H0R1 490 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 TASP1Q9H6P5 420 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 MRM3Q9HC36 420 aaKnown RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 CRTAC1Q9NQ79 661 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 C20orf96Q9NUD7 363 aaPredicted RBP7.39□□□□□ -1.23
BEST3-212ENST00000553096 SAGE1Q9NXZ1 904 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 PACSIN3Q9UKS6 424 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 SARDHQ9UL12 918 aa7.39□□□□□ -1.23
BEST3-212ENST00000553096 C9IYK1 514 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 GABRDO14764 452 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ALDH1A1P00352 501 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PGK1P00558 417 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 C7P10643 843 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PORP16435 677 aaPredicted RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 ZNF12P17014 697 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PRKACBP22694 351 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PSMB4P28070 264 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ACADSBP45954 432 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 NPY2RP49146 381 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 MRPS6P82932 125 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 ADIGQ0VDE8 80 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SLC12A1Q13621 1099 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SV2CQ496J9 727 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PDCD4Q53EL6 469 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 ARL13AQ5H913 290 aaPredicted RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 IL23RQ5VWK5 629 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 WSCD1Q658N2 575 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 TWF2Q6IBS0 349 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 CXCL17Q6UXB2 119 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 HACD2Q6Y1H2 254 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 GPRIN1Q7Z2K8 1008 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SVIPQ8NHG7 77 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ATP6V1E2Q96A05 226 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SGF29Q96ES7 293 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 P2RY11Q96G91 374 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 SNX25Q9H3E2 840 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 HIPK3Q9H422 1215 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 PALMDQ9NP74 551 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 ANLNQ9NQW6 1124 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 VANGL2Q9ULK5 521 aa7.38□□□□□ -1.23
BEST3-212ENST00000553096 COPG1Q9Y678 874 aaKnown RBP7.38□□□□□ -1.23
BEST3-212ENST00000553096 GREB1Q4ZG55 1949 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms