RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 LHCGRP22888 699 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 RENBPP51606 427 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 HADHBP55084 474 aaKnown RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 DYNLT1P63172 113 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 ITKQ08881 620 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 ELP6Q0PNE2 266 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 ZBTB17Q13105 803 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 C1orf61Q13536 156 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 HNRNPDQ14103 355 aaKnown RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 INPP5AQ14642 412 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 GRM3Q14832 879 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 CNGA3Q16281 694 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 IFI16Q16666 785 aaKnown RBP9.83□□□□□ -0.84
HDAC7-229ENST00000549883 PROX2Q3B8N5 592 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 DENND2CQ68D51 928 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 DHRS13Q6UX07 377 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 DPPA4Q7L190 304 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 TSPAN33Q86UF1 283 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 RFX6Q8HWS3 928 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 MAP7D3Q8IWC1 876 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 CNTD1Q8N815 330 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 DENND6BQ8NEG7 585 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 ARRDC2Q8TBH0 407 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 PIH1D2Q8WWB5 315 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 GATA6Q92908 595 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 TSGA13Q96PP4 275 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 HERPUD2Q9BSE4 406 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 TRIM10Q9UDY6 481 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 TTLL3Q9Y4R7 772 aa9.83□□□□□ -0.84
HDAC7-229ENST00000549883 LY6G6EA0A0G2JKS1 128 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 YKT6O15498 198 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 LZTS3O60299 673 aaPredicted RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 GCATO75600 419 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 PGLSO95336 258 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CPP00450 1065 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 PRLP01236 227 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 JCHAINP01591 159 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CSF2P04141 144 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CCNB1P14635 433 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 NME1P15531 152 aaKnown RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 JUNDP17535 347 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CCNCP24863 283 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 HSPA9P38646 679 aaKnown RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CDKN2BP42772 138 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 RABIFP47224 123 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 ACADVLP49748 655 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 PPIDQ08752 370 aaKnown RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 LRRC14Q15048 493 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 ACOX1Q15067 660 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 SPA17Q15506 151 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 TAZQ16635 292 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 LRRC38Q5VT99 294 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 KAZNQ674X7 775 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 AADACL2Q6P093 401 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 ERAP2Q6P179 960 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 HSD11B1LQ7Z5J1 315 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 PARGQ86W56 976 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 RHOT1Q8IXI2 618 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CCDC13Q8IYE1 715 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CCDC170Q8IYT3 715 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 OXR1Q8N573 874 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 PAF1Q8N7H5 531 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CCNYQ8ND76 341 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 ZNF548Q8NEK5 533 aaPredicted RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 TPCN2Q8NHX9 752 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 PTCD2Q8WV60 388 aaKnown RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 TSACCQ96A04 125 aaPredicted RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 HDAC11Q96DB2 347 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 COQ10AQ96MF6 247 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 OLFM3Q96PB7 478 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 DESI2Q9BSY9 194 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 LGR4Q9BXB1 951 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CLPBQ9H078 707 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 BRD8Q9H0E9 1235 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 APOBEC2Q9Y235 224 aaKnown RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 CHKBQ9Y259 395 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 RAI2Q9Y5P3 530 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 U3KQA8 63 aa9.82□□□□□ -0.84
HDAC7-229ENST00000549883 COL27A1Q8IZC6 1860 aaPredicted RBP9.82□□□□□ -0.84
HDAC7-229ENST00000549883 IGF2RP11717 2491 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 APOL1O14791 398 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 FZD6O60353 706 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 SOCS5O75159 536 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 HEXIM1O94992 359 aaKnown RBP9.81□□□□□ -0.84
HDAC7-229ENST00000549883 ELFN1P0C7U0 828 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 VIPR1P32241 457 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 CYLC1P35663 651 aaPredicted RBP9.81□□□□□ -0.84
HDAC7-229ENST00000549883 HNF1BP35680 557 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 ETV3P41162 512 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 SLC1A1P43005 524 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 SUOXP51687 545 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 THOP1P52888 689 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 AP1B1Q10567 949 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 KIF26BQ2KJY2 2108 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 ALG11Q2TAA5 492 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 DEFB133Q30KQ1 61 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 ALG1LQ6GMV1 187 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 UNQ6494/PRO21346Q6UXR6 183 aa9.81□□□□□ -0.84
HDAC7-229ENST00000549883 SPOCD1Q6ZMY3 1216 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms