RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 ARIH1Q9Y4X5 557 aaPredicted RBP6.35□□□□□ -1.39
LTBR-212ENST00000543542 FADS3Q9Y5Q0 445 aa6.35□□□□□ -1.39
LTBR-212ENST00000543542 FANCMQ8IYD8 2048 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 A0A0J9YYE9 177 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 C1orf232A0A0U1RR37 186 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TSPAN11A1L157 253 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 IGLON5A6NGN9 336 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ANKRD66B4E2M5 251 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 CCDC188H7C350 402 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TRAFD1O14545 582 aaPredicted RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 SLC31A1O15431 190 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TM7SF2O76062 418 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 METTL18O95568 372 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 NDST3O95803 873 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 PAK4O96013 591 aaPredicted RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 AGTP01019 485 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TRBC1P01850 177 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 CFIP05156 583 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 PIRTP0C851 137 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ZSCAN5DPP0CG00 497 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 HLA-DPA1P20036 260 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ITPKAP23677 461 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 CD27P26842 260 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 AKT2P31751 481 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 RPL22P35268 128 aaKnown RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 HNF1BP35680 557 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 NUDT1P36639 197 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 GRIA4P48058 902 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 FNTAP49354 379 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 CCR5P51681 352 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 C21orf59P57076 290 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TAS2R38P59533 333 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SARNPP82979 210 aaKnown RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 DR1Q01658 176 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 NHLH1Q02575 133 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 C2orf54Q08AI8 447 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 GPS1Q13098 491 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SPARCL1Q14515 664 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 STAT4Q14765 748 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TEAD4Q15561 434 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SLC14A2Q15849 920 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 CCDC6Q16204 474 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TMEM52BQ4KMG9 183 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SEL1L3Q68CR1 1132 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 NAPEPLDQ6IQ20 393 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 DPPA4Q7L190 304 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 RABEPKQ7Z6M1 372 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 PRUNE1Q86TP1 453 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 LINC00523Q86TU6 105 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TRIM69Q86WT6 500 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 CREG2Q8IUH2 290 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SLC41A1Q8IVJ1 513 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ZCCHC9Q8N567 271 aaKnown RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 PDCD7Q8N8D1 485 aaKnown RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 DNAAF3Q8N9W5 541 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 C12orf50Q8NA57 414 aaPredicted RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 BLOC1S5Q8TDH9 187 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 PIH1D2Q8WWB5 315 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SKA1Q96BD8 255 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ECHDC3Q96DC8 303 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SCRN2Q96FV2 425 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 OXNAD1Q96HP4 312 aaPredicted RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 LOXL4Q96JB6 756 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SERAC1Q96JX3 654 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 NSMCE3Q96MG7 304 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SRPK1Q96SB4 655 aaKnown RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 KRT12Q99456 494 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 APOL2Q9BQE5 337 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 SLC17A9Q9BYT1 436 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 LRRC40Q9H9A6 602 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ETNK1Q9HBU6 452 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 FZD3Q9NPG1 666 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ASIC3Q9UHC3 531 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 TPX2Q9ULW0 747 aaKnown RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 DMTF1Q9Y222 760 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 FNDC3AQ9Y2H6 1198 aaKnown RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.34□□□□□ -1.39
LTBR-212ENST00000543542 COQ6Q9Y2Z9 468 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 PLXNA2O75051 1894 aa6.34□□□□□ -1.39
LTBR-212ENST00000543542 ZNF318Q5VUA4 2279 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 A0A1B0GTW7 788 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 A0A1W2PPC4 97 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 CAPN8A6NHC0 703 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 NPIPB15A6NHN6 443 aaPredicted RBP6.33□□□□□ -1.4
LTBR-212ENST00000543542 PRR5-ARHGAP8B1AHC4 643 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 PRAMEF26H0Y7S4 382 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 FPGTO14772 594 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 AREL1O15033 823 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 KHNYNO15037 678 aaKnown RBP6.33□□□□□ -1.4
LTBR-212ENST00000543542 BCAT2O15382 392 aaPredicted RBP6.33□□□□□ -1.4
LTBR-212ENST00000543542 FZD6O60353 706 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 USP12O75317 370 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 EPN2O95208 641 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 CLDN7O95471 211 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 PCCBP05166 539 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 FGF1P05230 155 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 IGHV4-34P06331 123 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 APRTP07741 180 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 RETP07949 1114 aa6.33□□□□□ -1.4
LTBR-212ENST00000543542 C7P10643 843 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms