RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 SMYD2Q9NRG4 433 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CISHQ9NSE2 258 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 PNPLA3Q9NST1 481 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 FAM86C1Q9NVL1 165 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 KLHL11Q9NVR0 708 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 GIN1Q9NXP7 522 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 EPS15L1Q9UBC2 864 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 COPG2Q9UBF2 871 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 EMCNQ9ULC0 261 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 GINS2Q9Y248 185 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 DYRK1BQ9Y463 629 aa7.73□□□□□ -1.17
CCDC60-204ENST00000539847 CEP250Q9BV73 2442 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 VPS13AQ96RL7 3174 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 OTOGLQ3ZCN5 2332 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 A0A087WXM4 84 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 H3BNH8 94 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 DDX39AO00148 427 aaKnown RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ACOT8O14734 319 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 APOL1O14791 398 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 PGM3O95394 542 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ESRRBO95718 433 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ZBED1O96006 694 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 EIF2S1P05198 315 aaKnown RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 FAM163BP0C2L3 166 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 SPATA31D3P0C874 917 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 CSH1P0DML2 217 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 CSH2P0DML3 217 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 SERPINB5P36952 375 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 CD151P48509 253 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ESRRGP62508 458 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 STILQ15468 1287 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF829Q3KNS6 432 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ZBED5Q49AG3 693 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 PTPN20Q4JDL3 420 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 N4BP2L1Q5TBK1 243 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 SPOPLQ6IQ16 392 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 LRRC8BQ6P9F7 803 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 KLHL35Q6PF15 583 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 BNC2Q6ZN30 1099 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 LINC00299Q6ZSB3 139 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 SPATA31D4Q6ZUB0 917 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 FRMD7Q6ZUT3 714 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 OTOP3Q7RTS5 596 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 MAVSQ7Z434 540 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 DDX53Q86TM3 631 aaKnown RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 TTC30AQ86WT1 665 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 CARM1Q86X55 608 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 CHERPQ8IWX8 916 aaKnown RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 EXOC8Q8IYI6 725 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 DSELQ8IZU8 1212 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 SLC25A41Q8N5S1 370 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 TMEM102Q8N9M5 508 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 PDCD6IPQ8WUM4 868 aaKnown RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ACSF2Q96CM8 615 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 TMEM169Q96HH4 297 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 COX4I2Q96KJ9 171 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 DEPDC7Q96QD5 511 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 OSMRQ99650 979 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 DOK1Q99704 481 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 CPNE1Q99829 537 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF670Q9BS34 389 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 MSTO1Q9BUK6 570 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 EFHD1Q9BUP0 239 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 TDRD1Q9BXT4 1180 aaKnown RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 MRPL1Q9BYD6 325 aaKnown RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ILKAPQ9H0C8 392 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 POLR3FQ9H1D9 316 aaPredicted RBP7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ADAMTS10Q9H324 1103 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 MFSD1Q9H3U5 465 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 ZNF385DQ9H6B1 395 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 RRN3Q9NYV6 651 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 TMEM9Q9P0T7 183 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 DPP7Q9UHL4 492 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 SARDHQ9UL12 918 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 B3GNT3Q9Y2A9 372 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 MYRFQ9Y2G1 1151 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 RAP2CQ9Y3L5 183 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 EPG5Q9HCE0 2579 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 PLXNA4Q9HCM2 1894 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 MYO10Q9HD67 2058 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 NCOR2Q9Y618 2525 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 MYO15AQ9UKN7 3530 aa7.72□□□□□ -1.17
CCDC60-204ENST00000539847 PLXNA3P51805 1871 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 CACNA1BQ00975 2339 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 A0A1W2PP55 124 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 FAM170AA1A519 330 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 MAGEB16A2A368 324 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 H3BSA7 217 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 TRIM38O00635 465 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 MDM4O15151 490 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 HDAC3O15379 428 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 KCNN4O15554 427 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 PRPSAP2O60256 369 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 TRIM13O60858 407 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 ZNF623O75123 536 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 PAPLNO95428 1278 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 PDGFBP01127 241 aaPredicted RBP7.71□□□□□ -1.18
CCDC60-204ENST00000539847 ALDH2P05091 517 aa7.71□□□□□ -1.18
CCDC60-204ENST00000539847 HNRNPCP07910 306 aaKnown RBP eCLIP7.71□□□□□ -1.18
CCDC60-204ENST00000539847 THBS1P07996 1170 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms