RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NSUN2Q08J23 767 aaKnown RBP eCLIP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 KLHL30Q0D2K2 578 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 DPYSQ14117 519 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 UGP2Q16851 508 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 KLHL40Q2TBA0 621 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 LRRC73Q5JTD7 316 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ARHGAP36Q6ZRI8 547 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 RFX8Q6ZV50 586 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ZSWIM9Q86XI8 627 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ZNF354CQ86Y25 554 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ARL14Q8N4G2 192 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 NPWQ8N729 165 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ZNF548Q8NEK5 533 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ECHDC3Q96DC8 303 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 CELF6Q96J87 481 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 NSMCE3Q96MG7 304 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 ZNF641Q96N77 438 aaPredicted RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 TUBGCP5Q96RT8 1024 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 DHX35Q9H5Z1 703 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 CWC15Q9P013 229 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 CNOT8Q9UFF9 292 aaKnown RBP10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 PCSK1NQ9UHG2 260 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 SALL4Q9UJQ4 1053 aa10.15□□□□□ -0.78
CLSTN3-203ENST00000534830 RELNP78509 3460 aa10.15□□□□□ -0.79
CLSTN3-203ENST00000534830 NBASA2RRP1 2371 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 A0A1W2PQJ5 194 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 PMS2P1A4D2B8 440 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 CFAP69A5D8W1 941 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 ENO4A6NNW6 628 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 CDRT15L2A8MXV6 281 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 TRAFD1O14545 582 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 AQP9O43315 295 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 GCATO75600 419 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 RNF8O76064 485 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 TNFSF15O95150 251 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 MYBL1P10243 752 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 ALPPL2P10696 532 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 JUNDP17535 347 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 IL1R2P27930 398 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 DUSP3P51452 185 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 ELP6Q0PNE2 266 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 PTK2BQ14289 1009 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 RFTN1Q14699 578 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 DPYSL2Q16555 572 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 WSCD2Q2TBF2 565 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 ZCCHC8Q6NZY4 707 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 BRAT1Q6PJG6 821 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 TP53INP2Q8IXH6 220 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 TSEN2Q8NCE0 465 aaKnown RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 IFI44Q8TCB0 444 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 CXorf40AQ8TE69 158 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 BTN2A2Q8WVV5 523 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 SYN2Q92777 582 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 SGF29Q96ES7 293 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 PRR11Q96HE9 360 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 EXOC2Q96KP1 924 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 NCAPGQ9BPX3 1015 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 BOCQ9BWV1 1114 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 TCEAL2Q9H3H9 227 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 PCDH12Q9NPG4 1184 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 EVA1BQ9NVM1 165 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 KCNK4Q9NYG8 393 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 ATXN7L1Q9ULK2 861 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 PCDHGA8Q9Y5G5 932 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 ENTPD2Q9Y5L3 495 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 SCINQ9Y6U3 715 aa10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 ARHGEF17Q96PE2 2063 aaPredicted RBP10.14□□□□□ -0.79
CLSTN3-203ENST00000534830 EME2A4GXA9 379 aaPredicted RBP10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 H3BM21 787 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 MUSKO15146 869 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 PRPSAP2O60256 369 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 PPFIA2O75334 1257 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 PALMO75781 387 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 PEX11BO96011 259 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 ITGB2P05107 769 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 TCF4P15884 667 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 GM2AP17900 193 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 TGM2P21980 687 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 EIF4A3P38919 411 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 MMP12P39900 470 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 PEX5P50542 639 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 FANCCQ00597 558 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 IL10RBQ08334 325 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 IRF4Q15306 451 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 MACC1Q6ZN28 852 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 POLNQ7Z5Q5 900 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 SRLQ86TD4 932 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 VPS36Q86VN1 386 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 CAMK1DQ8IU85 385 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 RBFAQ8N0V3 343 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 LZTR1Q8N653 840 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 NIPA2Q8N8Q9 360 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 SPOCK2Q92563 424 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 ZNF653Q96CK0 615 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 TRIM11Q96F44 468 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 C1QTNF7Q9BXJ2 289 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 CLPBQ9H078 707 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 CBX8Q9HC52 389 aa10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 MRPL47Q9HD33 250 aaKnown RBP10.13□□□□□ -0.79
CLSTN3-203ENST00000534830 ETNK2Q9NVF9 386 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms