RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 TRAF2Q12933 501 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 XRCC4Q13426 336 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 MTM1Q13496 603 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 FZD2Q14332 565 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 IHHQ14623 411 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 ST3GAL2Q16842 350 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 CFAP58Q5T655 872 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 SPOCD1Q6ZMY3 1216 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 RAB44Q7Z6P3 723 aaPredicted RBP9.89□□□□□ -0.83
NUP98-220ENST00000533346 NDUFAF2Q8N183 169 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 CACTIN-AS1Q8N1I8 211 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 SDR16C5Q8N3Y7 309 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 RNF10Q8N5U6 811 aaKnown RBP9.89□□□□□ -0.83
NUP98-220ENST00000533346 CNTD1Q8N815 330 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.89□□□□□ -0.83
NUP98-220ENST00000533346 RHBDD1Q8TEB9 315 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 BTN2A2Q8WVV5 523 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 KLK6Q92876 244 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 RNF25Q96BH1 459 aaPredicted RBP9.89□□□□□ -0.83
NUP98-220ENST00000533346 RBM41Q96IZ5 413 aaKnown RBP9.89□□□□□ -0.83
NUP98-220ENST00000533346 ZNF830Q96NB3 372 aaPredicted RBP9.89□□□□□ -0.83
NUP98-220ENST00000533346 SEMA3CQ99985 751 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 LACRTQ9GZZ8 138 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 RBM22Q9NW64 420 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUP98-220ENST00000533346 DNPEPQ9ULA0 475 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 ITM2BQ9Y287 266 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 PCDHB9Q9Y5E1 797 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 PCDHGC4Q9Y5F7 938 aa9.89□□□□□ -0.83
NUP98-220ENST00000533346 CACNA1GO43497 2377 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 PLXNB3Q9ULL4 1909 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 A0A0J9YYE9 177 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 GOLGA6L6A8MZA4 724 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 HACD1B0YJ81 288 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 TPP1O14773 563 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 MTSS1O43312 755 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 ZNF189O75820 626 aaPredicted RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 PIAS2O75928 621 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 HEXIM1O94992 359 aaKnown RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 PRLP01236 227 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 TRBC1P01850 177 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 KRT1P04264 644 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 HLA-DQB2P05538 268 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 ITGAVP06756 1048 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 MMP2P08253 660 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 CYP2A6P11509 494 aaPredicted RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 ZNF30P17039 623 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 CA4P22748 312 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 VIPR1P32241 457 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 GJC1P36383 396 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 CLDN2P57739 230 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 MAXP61244 160 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 HNRNPKP61978 463 aaKnown RBP eCLIP9.88□□□□□ -0.83
NUP98-220ENST00000533346 DPTQ07507 201 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 KIF5AQ12840 1032 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 BNIP3Q12983 259 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 ZNF211Q13398 564 aaPredicted RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 ILKQ13418 452 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 LRRC14Q15048 493 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 PRKD1Q15139 912 aaPredicted RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 WSCD2Q2TBF2 565 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 TEX44Q53QW1 395 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 ZFYVE27Q5T4F4 411 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 ARMC12Q5T9G4 340 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 ESRP1Q6NXG1 681 aaKnown RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 MACC1Q6ZN28 852 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 BBS12Q6ZW61 710 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 DAAM2Q86T65 1068 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 NT5DC3Q86UY8 548 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 PARGQ86W56 976 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 SLC25A45Q8N413 288 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 FAM181AQ8N9Y4 354 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 KIAA1524Q8TCG1 905 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 SETD7Q8WTS6 366 aaKnown RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 COQ10AQ96MF6 247 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 CAMK1GQ96NX5 476 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 VAT1Q99536 393 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 TDRD1Q9BXT4 1180 aaKnown RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 NT5MQ9NPB1 228 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 FZD3Q9NPG1 666 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 MBNL1Q9NR56 388 aaKnown RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 TFR2Q9UP52 801 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 APOBEC2Q9Y235 224 aaKnown RBP9.88□□□□□ -0.83
NUP98-220ENST00000533346 CA5BQ9Y2D0 317 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 BTBD3Q9Y2F9 522 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 RAI2Q9Y5P3 530 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 DUSP10Q9Y6W6 482 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 WDFY3Q8IZQ1 3526 aa9.88□□□□□ -0.83
NUP98-220ENST00000533346 NEMP2A6NFY4 417 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 MIF4GDA9UHW6 222 aaKnown RBP9.87□□□□□ -0.83
NUP98-220ENST00000533346 APOC4-APOC2K7ER74 178 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 TNFRSF10CO14798 259 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 SCAMP1O15126 338 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 CST8O60676 142 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 RECQL5O94762 991 aaPredicted RBP9.87□□□□□ -0.83
NUP98-220ENST00000533346 CPP00450 1065 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 APOC2P02655 101 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 KRT10P13645 584 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 DGKAP23743 735 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 ACP1P24666 158 aa9.87□□□□□ -0.83
NUP98-220ENST00000533346 BLKP51451 505 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms