RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 B3GNT6Q6ZMB0 384 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 LURAP1LQ8IV03 231 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 GJC3Q8NFK1 279 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 CCDC136Q96JN2 1154 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 PCGF6Q9BYE7 350 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 LMAN2LQ9H0V9 348 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 CHODLQ9H9P2 273 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 C17orf75Q9HAS0 396 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 PLEKHA5Q9HAU0 1116 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 SAYSD1Q9NPB0 183 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 TMEM30AQ9NV96 361 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 MCM9Q9NXL9 1143 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 TAAR2Q9P1P5 351 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 GRHPRQ9UBQ7 328 aa3.98□□□□□ -1.77
CSDE1-210ENST00000525878 PDS5AQ29RF7 1337 aaKnown RBP3.97□□□□□ -1.77
CSDE1-210ENST00000525878 STX16-NPEPL1H3BU86 382 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 STX16O14662 325 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 KLK8O60259 260 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 VEGFAP15692 232 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-210ENST00000525878 NR1H2P55055 460 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 TBX4P57082 545 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 BLMHQ13867 455 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 ARHGEF6Q15052 776 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 CES5AQ6NT32 575 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 C17orf99Q6UX52 265 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 FOXRED2Q8IWF2 684 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 ODF3L1Q8IXM7 274 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 METTL27Q8N6F8 245 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-210ENST00000525878 RAB40AQ8WXH6 277 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 SH3KBP1Q96B97 665 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 ALG14Q96F25 216 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 F2RL3Q96RI0 385 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 TWNKQ96RR1 684 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 BARHL1Q9BZE3 327 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 TINAGQ9UJW2 476 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 POU2F3Q9UKI9 436 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 DERAQ9Y315 318 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 PCDHGB5Q9Y5G0 923 aa3.97□□□□□ -1.77
CSDE1-210ENST00000525878 IGKV3D-15A0A087WSY6 115 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 FAM90A7PA6NKC0 464 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 FAM90A22PA8MWA6 464 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 FAM90A12PA8MX19 464 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 FAM90A23PA8MXZ1 464 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 CAPN9O14815 690 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 TK1P04183 234 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 IFIT2P09913 472 aaKnown RBP3.96□□□□□ -1.78
CSDE1-210ENST00000525878 ADD2P35612 726 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 IL15P40933 162 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-210ENST00000525878 PPIGQ13427 754 aaKnown RBP eCLIP3.96□□□□□ -1.78
CSDE1-210ENST00000525878 CTXN3Q4LDR2 81 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 ARHGAP11AQ6P4F7 1023 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 TBC1D26Q86UD7 250 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.96□□□□□ -1.78
CSDE1-210ENST00000525878 CPXM2Q8N436 756 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 SLC24A4Q8NFF2 622 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 MAGEC3Q8TD91 643 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 LGALS12Q96DT0 336 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 C17orf77Q96MU5 243 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 HAUS8Q9BT25 410 aa3.96□□□□□ -1.78
CSDE1-210ENST00000525878 CISD1Q9NZ45 108 aaKnown RBP3.96□□□□□ -1.78
CSDE1-210ENST00000525878 RALYQ9UKM9 306 aaKnown RBP3.96□□□□□ -1.78
CSDE1-210ENST00000525878 IGKV3D-20A0A0C4DH25 116 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 ARHGAP10A1A4S6 786 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 CD58P19256 250 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 FMO5P49326 533 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 AARSP49588 968 aaKnown RBP eCLIP3.95□□□□□ -1.78
CSDE1-210ENST00000525878 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
CSDE1-210ENST00000525878 SREBF2Q12772 1141 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 TIGD6Q17RP2 521 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 KCNT1Q5JUK3 1230 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 ZNF772Q68DY9 489 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-210ENST00000525878 KRBA2Q6ZNG9 492 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 WDR63Q8IWG1 891 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 MAPK1IP1LQ8NDC0 245 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 SLC20A1Q8WUM9 679 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 PPM1EQ8WY54 764 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 ABTB1Q969K4 478 aaPredicted RBP3.95□□□□□ -1.78
CSDE1-210ENST00000525878 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.95□□□□□ -1.78
CSDE1-210ENST00000525878 ZNF700Q9H0M5 742 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 SMYD2Q9NRG4 433 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 DNAJC16Q9Y2G8 782 aa3.95□□□□□ -1.78
CSDE1-210ENST00000525878 PABPN1LA6NDY0 278 aaKnown RBP3.94□□□□□ -1.78
CSDE1-210ENST00000525878 PMS2P5A8MQ11 134 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 PPM1GO15355 546 aaPredicted RBP3.94□□□□□ -1.78
CSDE1-210ENST00000525878 PAX1P15863 534 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 S1PR1P21453 382 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 ALDH4A1P30038 563 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 HOXC13P31276 330 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 KRT2P35908 639 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 CLDN2P57739 230 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 RUNX2Q13950 521 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 NEDD9Q14511 834 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 EDRF1Q3B7T1 1238 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 CCDC38Q502W7 563 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 HSP90AB2PQ58FF8 381 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 IRAK1BP1Q5VVH5 260 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 ANKRD54Q6NXT1 300 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 MOB3CQ70IA8 216 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 KMT5CQ86Y97 462 aa3.94□□□□□ -1.78
CSDE1-210ENST00000525878 C1orf87Q8N0U7 546 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms