RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 VSIG10L2P0DP72 767 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 FCER1AP12319 257 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 ATF2P15336 505 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 PRLRP16471 622 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 ITIH1P19827 911 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 CYP3A7P24462 503 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 POU1F1P28069 291 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 NDUFV1P49821 464 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 RPS6KA3P51812 740 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 ITGA1P56199 1179 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 CXCL9Q07325 125 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 PIGFQ07326 219 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 FGFBP1Q14512 234 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 SNAPC1Q16533 368 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 TIGD5Q53EQ6 642 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 NOMO2Q5JPE7 1267 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 PLA2G4FQ68DD2 849 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 NEK5Q6P3R8 708 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 TRIM72Q6ZMU5 477 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 TAOK1Q7L7X3 1001 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 TMEM151BQ8IW70 566 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 UXS1Q8NBZ7 420 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 PDZD8Q8NEN9 1154 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 TSPAN14Q8NG11 270 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 OR52M1Q8NGK5 317 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 LRRC8CQ8TDW0 803 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 CHURC1Q8WUH1 139 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 THRSPQ92748 146 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 CASP10Q92851 521 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 DNASE1L2Q92874 299 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 PABPC5Q96DU9 382 aaKnown RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 ARSGQ96EG1 525 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 PKP2Q99959 881 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 SEMA3CQ99985 751 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 MOV10L1Q9BXT6 1211 aaKnown RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 CNOT10Q9H9A5 744 aaKnown RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 KIF9Q9HAQ2 790 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 RANGRFQ9HD47 186 aaPredicted RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 ARL8BQ9NVJ2 186 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 VSX1Q9NZR4 365 aaPredicted RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 KIAA1456Q9P272 454 aa4.09□□□□□ -1.76
SKP1-209ENST00000522552 ZMAT5Q9UDW3 170 aaKnown RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 R3HDM2Q9Y2K5 976 aaKnown RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 ZNF335Q9H4Z2 1342 aaPredicted RBP4.09□□□□□ -1.76
SKP1-209ENST00000522552 A0A0A6YYC8 382 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 LNP1A1A4G5 178 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 EME2A4GXA9 379 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 PRR19A6NJB7 356 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 I3L1I5 382 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 GMFGO60234 142 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 NKX2-2O95096 273 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 SCAF4O95104 1147 aaKnown RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 MED26O95402 600 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 ITGB1P05556 798 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 C8BP07358 591 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 OR52Z1P0C646 297 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 GPTP24298 496 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 HOXA10P31260 410 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 SFNP31947 248 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 CXCR5P32302 372 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 GJC1P36383 396 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 MTHFSP49914 203 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 NAGLUP54802 743 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 GCNT1Q02742 428 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 ACSM2AQ08AH3 577 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 TOP3AQ13472 1001 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 OLIG2Q13516 323 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 DPYSQ14117 519 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 E2F2Q14209 437 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 NR1I3Q14994 352 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 KARSQ15046 597 aaKnown RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 FUT11Q495W5 492 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 GXYLT1Q4G148 440 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 CXorf66Q5JRM2 361 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 TEX35Q5T0J7 233 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 RIPPLY2Q5TAB7 128 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 ACSM2BQ68CK6 577 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 KRT40Q6A162 431 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 TXNDC8Q6A555 127 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 PM20D1Q6GTS8 502 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 RPTNQ6XPR3 784 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 LARP4Q71RC2 724 aaKnown RBP eCLIP4.08□□□□□ -1.763e-6■□□□□ 10.8
SKP1-209ENST00000522552 TRAPPC11Q7Z392 1133 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 RNF169Q8NCN4 708 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 POC1BQ8TC44 478 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 KAT2AQ92830 837 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 MIB2Q96AX9 1013 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 HRASLS5Q96KN8 279 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 CEP295NLQ96MC4 621 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 EGFL8Q99944 293 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 DPYSL5Q9BPU6 564 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 H2AFJQ9BTM1 129 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 TBCDQ9BTW9 1192 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 CARD6Q9BX69 1037 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 TEX13AQ9BXU3 409 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 OSBPL1AQ9BXW6 950 aa4.08□□□□□ -1.76
SKP1-209ENST00000522552 GCOM2Q9BZD3 368 aaPredicted RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 PUS3Q9BZE2 481 aaKnown RBP4.08□□□□□ -1.76
SKP1-209ENST00000522552 CCSER1Q9C0I3 900 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms