RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 SRBD1Q8N5C6 995 aaKnown RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 FRMD1Q8N878 549 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 CADM4Q8NFZ8 388 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 FAR1Q8WVX9 515 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 ASB5Q8WWX0 329 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 SGCDQ92629 289 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 MSI2Q96DH6 328 aaKnown RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 PGAM5Q96HS1 289 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 NTPCRQ9BSD7 190 aaKnown RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 MXD3Q9BW11 206 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 PCDHB16Q9NRJ7 776 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 C20orf141Q9NUB4 165 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.24□□□□□ -1.73
SQLE-204ENST00000520493 ARGLU1Q9NWB6 273 aaPredicted RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 ZHX1Q9UKY1 873 aaPredicted RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 CORO1CQ9ULV4 474 aaPredicted RBP4.24□□□□□ -1.73
SQLE-204ENST00000520493 PCDHGB4Q9UN71 923 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 ZNF711Q9Y462 761 aa4.24□□□□□ -1.73
SQLE-204ENST00000520493 UTYO14607 1347 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 RPGRIP1LQ68CZ1 1315 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 RPS10-NUDT3A0A1W2PQS6 291 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 TCRBV7S3A2A0A539 114 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 BICDL2A1A5D9 508 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 A6NNC1 897 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 FAM157AC9JC47 383 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 USP17L23D6RBM5 183 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 LDLRAD4O15165 306 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 RNMTO43148 476 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 TACC1O75410 805 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 ERAL1O75616 437 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 BEST1O76090 585 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 CSPG5O95196 566 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 IL1AP01583 271 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 POU1F1P28069 291 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 CTNNA1P35221 906 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 HADHAP40939 763 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 UBA7P41226 1012 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 CSTF3Q12996 717 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 OLIG2Q13516 323 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 ALG10Q5BKT4 473 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 ALG10BQ5I7T1 473 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 KIAA1755Q5JYT7 1200 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 NUGGCQ68CJ6 796 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 GPR139Q6DWJ6 353 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 NCAPH2Q6IBW4 605 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 KLHL35Q6PF15 583 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 VSIG1Q86XK7 387 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 ZDHHC23Q8IYP9 409 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 PERPQ96FX8 193 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 CNDP2Q96KP4 475 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 SMARCAD1Q9H4L7 1026 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 SLC32A1Q9H598 525 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 KAT14Q9H8E8 782 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 FBRSL1Q9HCM7 1045 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 ASAH2Q9NR71 780 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 SNTG1Q9NSN8 517 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 SPATS2LQ9NUQ6 558 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 HIF1ANQ9NWT6 349 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 SELENONQ9NZV5 590 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 HAO1Q9UJM8 370 aa4.23□□□□□ -1.73
SQLE-204ENST00000520493 INTS6Q9UL03 887 aaKnown RBP4.23□□□□□ -1.73
SQLE-204ENST00000520493 FAM237BA0A1B0GVD1 139 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 GAGE12JA6NER3 117 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 CDRT15L2A8MXV6 281 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 FOXO6A8MYZ6 492 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 A8MZ25 164 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 EIF3CLB5ME19 914 aaKnown RBP4.22□□□□□ -1.73
SQLE-204ENST00000520493 EBAG9O00559 213 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 MDM4O15151 490 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 CBX6O95503 412 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 IFNA2P01563 188 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 KLKB1P03952 638 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 WNT1P04628 370 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 HOXB2P14652 356 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 YWHAQP27348 245 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 HOXA13P31271 388 aaPredicted RBP4.22□□□□□ -1.73
SQLE-204ENST00000520493 PPARGP37231 505 aaPredicted RBP4.22□□□□□ -1.73
SQLE-204ENST00000520493 CENPAP49450 140 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 ARSFP54793 590 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 SNX16P57768 344 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 PMPCAQ10713 525 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 KRT24Q2M2I5 525 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 KRTAP27-1Q3LI81 207 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 FBXO43Q4G163 708 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 AAGABQ6PD74 315 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 CPLX2Q6PUV4 134 aaKnown RBP4.22□□□□□ -1.73
SQLE-204ENST00000520493 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.22□□□□□ -1.73
SQLE-204ENST00000520493 WDR5BQ86VZ2 330 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 CNTROBQ8N137 903 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 WDTC1Q8N5D0 677 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 B4GALNT2Q8NHY0 566 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 ATP6V1E2Q96A05 226 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 JAKMIP2Q96AA8 810 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 VMP1Q96GC9 406 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 SPATA17Q96L03 361 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 NCAPGQ9BPX3 1015 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 ADPGKQ9BRR6 497 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 FRMD8Q9BZ67 464 aaPredicted RBP4.22□□□□□ -1.73
SQLE-204ENST00000520493 OR10A4Q9H209 315 aa4.22□□□□□ -1.73
SQLE-204ENST00000520493 SH2D4AQ9H788 454 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms