RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 TBC1D4O60343 1298 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 PGM3O95394 542 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 METTL18O95568 372 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 SERPINE1P05121 402 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 GLULP15104 373 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 FOSL2P15408 326 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 HOXD12P35452 270 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 PBX2P40425 430 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 MTHFRP42898 656 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 STT3AP46977 705 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 SLC1A6P48664 564 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 COPAP53621 1224 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 BPIFB3P59826 476 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 LILRA4P59901 499 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 IFITM3Q01628 133 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 CHI3L2Q15782 390 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 ATP6AP1Q15904 470 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 PSMD5Q16401 504 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 SPATS1Q496A3 300 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 ATG16L1Q676U5 607 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 FAM45BPQ6NSW5 357 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 DENND5BQ6ZUT9 1274 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 PTRH1Q86Y79 214 aaKnown RBP7.46□□□□□ -1.21
CLIP1-205ENST00000514271 CPNE9Q8IYJ1 553 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 SLC25A41Q8N5S1 370 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 GSDMBQ8TAX9 411 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 FAM110BQ8TC76 370 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 FAM45AQ8TCE6 357 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 HSPBAP1Q96EW2 488 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 ZFP42Q96MM3 310 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 ZMAT2Q96NC0 199 aaKnown RBP7.46□□□□□ -1.21
CLIP1-205ENST00000514271 SLC29A1Q99808 456 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 NIF3L1Q9GZT8 377 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 TTYH1Q9H313 450 aaPredicted RBP7.46□□□□□ -1.21
CLIP1-205ENST00000514271 MRGBPQ9NV56 204 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 SPATA7Q9P0W8 599 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 AFF4Q9UHB7 1163 aaKnown RBP7.46□□□□□ -1.21
CLIP1-205ENST00000514271 SIX4Q9UIU6 781 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 PCDHGB1Q9Y5G3 927 aa7.46□□□□□ -1.21
CLIP1-205ENST00000514271 LCHNA4D1U4 455 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 HTR3EA5X5Y0 456 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 TMEM247A6NEH6 219 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 LYPLA1O75608 230 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 B3GAT3O94766 335 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 INMTO95050 263 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 CLPTM1O96005 669 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF12P17014 697 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 CPA2P48052 419 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 PPP3CCP48454 512 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF143P52747 638 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 SESN3P58005 492 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 IFITM2Q01629 132 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 YWHAHQ04917 246 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 SEMA3BQ13214 749 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 IKZF1Q13422 519 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 DPYSL2Q16555 572 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF699Q32M78 642 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 RASSF3Q86WH2 238 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ZNF280BQ86YH2 543 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 MFSD6LQ8IWD5 586 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 VPS52Q8N1B4 723 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 MFSD4AQ8N468 514 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 DEFB123Q8N688 67 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 PDCD7Q8N8D1 485 aaKnown RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 C1orf127Q8N9H9 656 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 RP9Q8TA86 221 aaKnown RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ACDQ96AP0 544 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 HPDLQ96IR7 371 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 SENP8Q96LD8 212 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 KLHL5Q96PQ7 755 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 GRIP2Q9C0E4 1043 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 OXSMQ9NWU1 459 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 KLK14Q9P0G3 267 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 EBF1Q9UH73 591 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 HES2Q9Y543 173 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 PSAT1Q9Y617 370 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 GRXCR1A8MXD5 290 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 TRIM49D1C9J1S8 452 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 GABRDO14764 452 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 RPL17P18621 184 aaKnown RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 GRK2P25098 689 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 WEE1P30291 646 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 TUFMP49411 452 aaKnown RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 CLCNKBP51801 687 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 SNX16P57768 344 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ABCE1P61221 599 aaKnown RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 YBX1P67809 324 aaKnown RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 RHDQ02161 417 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 UGT3A2Q3SY77 523 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 OLFML1Q6UWY5 402 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ITIH5Q86UX2 942 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 ARID3BQ8IVW6 561 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 CCDC117Q8IWD4 279 aaPredicted RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 CNTD1Q8N815 330 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 KDM1BQ8NB78 822 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 PCDH19Q8TAB3 1148 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 MIPOL1Q8TD10 442 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 DQX1Q8TE96 717 aaKnown RBP7.46□□□□□ -1.22
CLIP1-205ENST00000514271 USP33Q8TEY7 942 aa7.46□□□□□ -1.22
CLIP1-205ENST00000514271 SLC22A17Q8WUG5 538 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms