RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 PHOSPHO2Q8TCD6 241 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 ZNF398Q8TD17 642 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 TOP1MTQ969P6 601 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 SYAP1Q96A49 352 aaPredicted RBP5.08□□□□□ -1.6
SNX25-206ENST00000513433 COQ8BQ96D53 544 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 RSPRY1Q96DX4 576 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 DAZAP1Q96EP5 407 aaKnown RBP5.08□□□□□ -1.6
SNX25-206ENST00000513433 HMCESQ96FZ2 354 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 BICD1Q96G01 975 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 CPB2Q96IY4 423 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 C5orf34Q96MH7 638 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 ACCSQ96QU6 501 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 MESP1Q9BRJ9 268 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 TRIM6Q9C030 488 aaPredicted RBP5.08□□□□□ -1.6
SNX25-206ENST00000513433 TTYH3Q9C0H2 523 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 SPRTNQ9H040 489 aaPredicted RBP5.08□□□□□ -1.6
SNX25-206ENST00000513433 CDT1Q9H211 546 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 NXF3Q9H4D5 531 aaKnown RBP5.08□□□□□ -1.6
SNX25-206ENST00000513433 TMEM161AQ9NX61 479 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 TBC1D7Q9P0N9 293 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 CGNQ9P2M7 1197 aaKnown RBP5.08□□□□□ -1.6
SNX25-206ENST00000513433 MAN1B1Q9UKM7 699 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 SHOC2Q9UQ13 582 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 GDAQ9Y2T3 454 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 PCDHB2Q9Y5E7 798 aa5.08□□□□□ -1.6
SNX25-206ENST00000513433 ATG2AQ2TAZ0 1938 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 TSC2P49815 1807 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 PDXKO00764 312 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 PSMA7O14818 248 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 OGTO15294 1046 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 CLDN3O15551 220 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 TGFB1I1O43294 461 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 UNC5CO95185 931 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 GJB5O95377 273 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 DLDP09622 509 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 STAG3L1P0CL83 205 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 ADSSP30520 456 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 PRCPP42785 496 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 HTRA4P83105 476 aaPredicted RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 POU5F1Q01860 360 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 LRRC63Q05C16 580 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 STIM1Q13586 685 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 SHHQ15465 462 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 EDRF1Q3B7T1 1238 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 ZCWPW2Q504Y3 356 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 FCRL6Q6DN72 434 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 RGS7BPQ6MZT1 257 aaPredicted RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 CAVIN1Q6NZI2 390 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 ARMCX5Q6P1M9 558 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 ZNF813Q6ZN06 617 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.07□□□□□ -1.6
SNX25-206ENST00000513433 MRPL10Q7Z7H8 261 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 HERC6Q8IVU3 1022 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 SYCP3Q8IZU3 236 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 ADSSL1Q8N142 457 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 TERB1Q8NA31 727 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 PNLDC1Q8NA58 520 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 ABHD11Q8NFV4 315 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 MVB12AQ96EY5 273 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 LENG8Q96PV6 779 aaPredicted RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 MSTO1Q9BUK6 570 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 EIF2AQ9BY44 585 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 MRPL9Q9BYD2 267 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 UBN1Q9NPG3 1134 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 AGPAT3Q9NRZ7 376 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 TYW1Q9NV66 732 aaKnown RBP5.07□□□□□ -1.6
SNX25-206ENST00000513433 TRAF3IP3Q9Y228 551 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 USP34Q70CQ2 3546 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 CFAP54Q96N23 3096 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 TRANK1O15050 2925 aa5.07□□□□□ -1.6
SNX25-206ENST00000513433 TCRBV5S1A1TA0A578 114 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 BICDL2A1A5D9 508 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 ANKRD63C9JTQ0 380 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 CALUO43852 315 aaPredicted RBP5.06□□□□□ -1.6
SNX25-206ENST00000513433 SNUPNO95149 360 aaKnown RBP5.06□□□□□ -1.6
SNX25-206ENST00000513433 LDHAP00338 332 aaKnown RBP5.06□□□□□ -1.6
SNX25-206ENST00000513433 NR3C1P04150 777 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 GRPP07492 148 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 ADRB2P07550 413 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 CLTAP09496 248 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 MLH1P40692 756 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 MMP13P45452 471 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 PDE6CP51160 858 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 TPTEP56180 551 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 ENPEPQ07075 957 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 MYO1EQ12965 1108 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 GRIK3Q13003 919 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 MYBPC2Q14324 1141 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 STX1AQ16623 288 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 DPCR1Q3MIW9 517 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 XKR4Q5GH76 650 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 CLLU1OSQ5K130 101 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 ATAT1Q5SQI0 421 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 CENPPQ6IPU0 288 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 CDR2LQ86X02 465 aaPredicted RBP5.06□□□□□ -1.6
SNX25-206ENST00000513433 GAS2L3Q86XJ1 694 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 BRSK2Q8IWQ3 736 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 NELFCDQ8IXH7 590 aa5.06□□□□□ -1.6
SNX25-206ENST00000513433 ZC3H3Q8IXZ2 948 aaKnown RBP5.06□□□□□ -1.6
SNX25-206ENST00000513433 LRRC43Q8N309 656 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms