RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MOSPD2Q8NHP6 518 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 KAT5Q92993 513 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 AGO4Q9HCK5 861 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 NMRK2Q9NPI5 230 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 SUCOQ9UBS9 1254 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 ABCG2Q9UNQ0 655 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 KIF20BQ96Q89 1820 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 A0A0J9YVX5 310 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 CHST10O43529 356 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 FAM189A1O60320 539 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 APOL3O95236 402 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 CYBBP04839 570 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 COX7A2P14406 83 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 CREB1P16220 341 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 ADRA2BP18089 450 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 CCR1P32246 355 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 IL2P60568 153 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 CACNB2Q08289 660 aaPredicted RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 CDH18Q13634 790 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 NKX1-1Q15270 411 aaPredicted RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 LSM12Q3MHD2 195 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 ATP13A4Q4VNC1 1196 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 SFT2D3Q587I9 215 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 DDI2Q5TDH0 399 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 VWA5B1Q5TIE3 1220 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 EFCAB12Q6NXP0 572 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 NPNTQ6UXI9 565 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 GPRIN3Q6ZVF9 776 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 C4orf32Q8N8J7 132 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 PHF10Q8WUB8 498 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 TNFRSF25Q93038 417 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 ALG2Q9H553 416 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 PIDD1Q9HB75 910 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 NT5MQ9NPB1 228 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 SCUBE2Q9NQ36 999 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 STOX2Q9P2F5 926 aaPredicted RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 CNOT6Q9ULM6 557 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 SCAF8Q9UPN6 1271 aaKnown RBP7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 ANGPT4Q9Y264 503 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 GIT1Q9Y2X7 761 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 IRAK3Q9Y616 596 aa7.34□□□□□ -1.23
UBE2D3-224ENST00000508474 ARPC4-TTLL3A0A0A6YYG9 625 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 UBXN8O00124 270 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 NPHS1O60500 1241 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 KHDRBS3O75525 346 aaKnown RBP7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 MYL3P08590 195 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 SUPT20HL2P0C7V6 817 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 RPL3P39023 403 aaKnown RBP7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 CD97P48960 835 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 TUFMP49411 452 aaKnown RBP7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 GPR15P49685 360 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 YWHAZP63104 245 aaKnown RBP7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 LIPEQ05469 1076 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 ORC1Q13415 861 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 VEPH1Q14D04 833 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 SPATS1Q496A3 300 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 ATP13A5Q4VNC0 1218 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 STXBP5Q5T5C0 1151 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 TAF8Q7Z7C8 310 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 ISOC1Q96CN7 298 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 TEFMQ96QE5 360 aaKnown RBP7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 ZNF347Q96SE7 839 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 CCSER2Q9H7U1 834 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 KCNQ5Q9NR82 932 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 SNX6Q9UNH7 406 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 PLCL2Q9UPR0 1127 aa7.34□□□□□ -1.24
UBE2D3-224ENST00000508474 ANKRD63C9JTQ0 380 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 PTX3P26022 381 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 CYP2C18P33260 490 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 AP3S2P59780 193 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 ZNF517Q6ZMY9 492 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 ADCK2Q7Z695 626 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 SPAG16Q8N0X2 631 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 C9orf43Q8TAL5 461 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 MMP19Q99542 508 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 CEP41Q9BYV8 373 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 ASB7Q9H672 318 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 GMIPQ9P107 970 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 LSM7Q9UK45 103 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 NEURL4Q96JN8 1562 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 OR14I1A6ND48 311 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 DHX15O43143 795 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 SUV39H1O43463 412 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 OR6B1O95007 311 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 FYNP06241 537 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 C2P06681 752 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 STAG3L1P0CL83 205 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 TXNP10599 105 aaKnown RBP7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 DSG3P32926 999 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 CAPZA2P47755 286 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 PRKCQQ04759 706 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 SPP2Q13103 211 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 FBXO43Q4G163 708 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 OGFOD2Q6N063 350 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 HS6ST3Q8IZP7 471 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 CYP4X1Q8N118 509 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 PIH1D2Q8WWB5 315 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 CD101Q93033 1021 aa7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 FAM126AQ9BYI3 521 aaPredicted RBP7.33□□□□□ -1.24
UBE2D3-224ENST00000508474 PAK6Q9NQU5 681 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms