RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 RAB20Q9NX57 234 aa12.6□□□□□ -0.39
LSM6-204ENST00000504181 PDXKO00764 312 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 POLR1CO15160 346 aaPredicted RBP12.59□□□□□ -0.39
LSM6-204ENST00000504181 MAPK13O15264 365 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 PPM1DO15297 605 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 SART1O43290 800 aaKnown RBP12.59□□□□□ -0.39
LSM6-204ENST00000504181 LRRTM2O43300 516 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 DPM1O60762 260 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 ZG16O60844 167 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 PDIA4P13667 645 aaKnown RBP12.59□□□□□ -0.39
LSM6-204ENST00000504181 BRD2P25440 801 aaKnown RBP12.59□□□□□ -0.39
LSM6-204ENST00000504181 NFKBIAP25963 317 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 MXI1P50539 228 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 CDK18Q07002 472 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 CUL2Q13617 745 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 CHRNA6Q15825 494 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 RETSATQ6NUM9 610 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 FAM173BQ6P4H8 233 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 C6orf15Q6UXA7 325 aaPredicted RBP12.59□□□□□ -0.39
LSM6-204ENST00000504181 SLC47A2Q86VL8 602 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 PLA2G15Q8NCC3 412 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 GALNT6Q8NCL4 622 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 ZSWIM1Q9BR11 485 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 ACSS2Q9NR19 701 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 ZNF451Q9Y4E5 1061 aa12.59□□□□□ -0.39
LSM6-204ENST00000504181 MAP1AP78559 2803 aaPredicted RBP12.59□□□□□ -0.39
LSM6-204ENST00000504181 ZSCAN5CA6NGD5 496 aaPredicted RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 ARGFXA6NJG6 315 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 PAGE1O75459 146 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 ZMPSTE24O75844 475 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 SNRPB2P08579 225 aaKnown RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 CCNB1P14635 433 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 CASP14P31944 242 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 ITGA1P56199 1179 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 PER3P56645 1201 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 YWHAEP62258 255 aaKnown RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 ARF5P84085 180 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 STK4Q13043 487 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 SQSTM1Q13501 440 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 CUL4BQ13620 913 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 C5orf22Q49AR2 442 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 PAPD7Q5XG87 772 aaKnown RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 BEND5Q7L4P6 421 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 ARHGAP22Q7Z5H3 698 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 SETD3Q86TU7 594 aaPredicted RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 NRROSQ86YC3 692 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 CISD2Q8N5K1 135 aaKnown RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 RBMXL3Q8N7X1 1067 aaKnown RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 PNPLA2Q96AD5 504 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 FUBP1Q96AE4 644 aaKnown RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 VOPP1Q96AW1 172 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 AHCYL2Q96HN2 611 aaKnown RBP12.58□□□□□ -0.4
LSM6-204ENST00000504181 TRIM62Q9BVG3 475 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 ATP13A1Q9HD20 1204 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 TAAR2Q9P1P5 351 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 KIAA1257Q9ULG3 409 aa12.58□□□□□ -0.4
LSM6-204ENST00000504181 PVALEFA0A1B0GWK0 134 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 CACNB4O00305 520 aaPredicted RBP12.57□□□□□ -0.4
LSM6-204ENST00000504181 CALUO43852 315 aaPredicted RBP12.57□□□□□ -0.4
LSM6-204ENST00000504181 NADKO95544 446 aaPredicted RBP12.57□□□□□ -0.4
LSM6-204ENST00000504181 NR2F2P24468 414 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 AK4P27144 223 aaPredicted RBP12.57□□□□□ -0.4
LSM6-204ENST00000504181 CLCN1P35523 988 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 KIAA1024LP59773 190 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 MTM1Q13496 603 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 TAF5Q15542 800 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 CNGA2Q16280 664 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 TMEM270Q6UE05 265 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 LYSMD3Q7Z3D4 306 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 IQCKQ8N0W5 287 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 NAGSQ8N159 534 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 UBR7Q8N806 425 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 STAMBPL1Q96FJ0 436 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 OSBPL1AQ9BXW6 950 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 MPP6Q9NZW5 540 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 PDP2Q9P2J9 529 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 SNX10Q9Y5X0 201 aa12.57□□□□□ -0.4
LSM6-204ENST00000504181 ZNF469Q96JG9 3925 aaPredicted RBP12.56□□□□□ -0.4
LSM6-204ENST00000504181 PRSS38A1L453 326 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 CD160O95971 181 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 ITGA3P26006 1051 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 OR1E1P30953 314 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 GTF2H1P32780 548 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 PTGER4P35408 488 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 YWHAZP63104 245 aaKnown RBP12.56□□□□□ -0.4
LSM6-204ENST00000504181 GPLD1P80108 840 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 CDK17Q00537 523 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 SLC20A2Q08357 652 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 LRMPQ12912 555 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 NME3Q13232 169 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 DNASE1L3Q13609 305 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 TMEM52BQ4KMG9 183 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 SLC30A9Q6PML9 568 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 GDPD4Q6W3E5 623 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 IQUBQ8NA54 791 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 ING2Q9H160 280 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 KLHL3Q9UH77 587 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 SMC3Q9UQE7 1217 aa12.56□□□□□ -0.4
LSM6-204ENST00000504181 CCDC88CQ9P219 2028 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms