RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 DNAJC18Q9H819 358 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 FAM204AQ9H8W3 233 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 EHMT1Q9H9B1 1298 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ACTR5Q9H9F9 607 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 MRPL44Q9H9J2 332 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 PPCSQ9HAB8 311 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 EML4Q9HC35 981 aaKnown RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 ACSS2Q9NR19 701 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 NSMCE4AQ9NXX6 385 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 H2AFY2Q9P0M6 372 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 KIAA1456Q9P272 454 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZNF112Q9UJU3 913 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 NUDT5Q9UKK9 219 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ADAMTS6Q9UKP5 1117 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 MTUS1Q9ULD2 1270 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CCPG1Q9ULG6 757 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 ZMYND8Q9ULU4 1186 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 COA3Q9Y2R0 106 aaPredicted RBP1.46□□□□□ -2.18
XRN1-214ENST00000498077 NEUROG3Q9Y4Z2 214 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 PAXBP1Q9Y5B6 917 aa1.46□□□□□ -2.18
XRN1-214ENST00000498077 CCDC7Q96M83 1385 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MYBPHLA2RUH7 354 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZBTB42B2RXF5 422 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 HNRNPCL2B2RXH8 293 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SLC33A1O00400 549 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 KRIT1O00522 736 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 XPNPEP2O43895 674 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 IGKV1-39P01597 117 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 IGKV1D-39P04432 117 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 AMY2AP04746 511 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CYP17A1P05093 508 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZNF286BP0CG31 522 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PDHBP11177 359 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZNF37AP17032 561 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 AMY2BP19961 511 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GLDCP23378 1020 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CNTFP26441 200 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FOXN2P32314 431 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MSX2P35548 267 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 LSSP48449 732 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PPP5CP53041 499 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OR2B6P58173 313 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 RAB14P61106 215 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PURAQ00577 322 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 PSMD2Q13200 908 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 BIRC3Q13489 604 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DDR2Q16832 855 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZC2HC1CQ53FD0 456 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 CCDC92Q53HC0 331 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 NKAPLQ5M9Q1 402 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 C6orf136Q5SQH8 315 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GORABQ5T7V8 394 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CDC73Q6P1J9 531 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PI16Q6UXB8 463 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 RTL4Q6ZR62 310 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 PPFIBP1Q86W92 1011 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CEP97Q8IW35 865 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CNTD1Q8N815 330 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TERB1Q8NA31 727 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OR8G5Q8NG78 346 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 UBE2FQ969M7 185 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PPP1R36Q96LQ0 422 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 FAM227BQ96M60 508 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GFM1Q96RP9 751 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 ADI1Q9BV57 179 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ELOVL1Q9BW60 279 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 C1QTNF4Q9BXJ3 329 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CARD11Q9BXL7 1154 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 YTHDF1Q9BYJ9 559 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 BCO2Q9BYV7 579 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CD244Q9BZW8 370 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NYXQ9GZU5 481 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MYH16Q9H6N6 1097 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TTC12Q9H892 705 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 USP36Q9P275 1121 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 RBPJLQ9UBG7 517 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 DAPK2Q9UIK4 370 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 PCDHGA6Q9Y5G7 932 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 OAS3Q9Y6K5 1087 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 RIF1Q5UIP0 2472 aaKnown RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 IGKV2D-30A0A075B6S6 120 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 TMEM238LA0A1B0GVL6 79 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ANKRD18BA2A2Z9 1011 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 KLRC4-KLRK1H3BQV0 150 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MAP2K7O14733 419 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 SGSM2O43147 1006 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 IDH3BO43837 385 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 HBP1O60381 514 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ACSL4O60488 711 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 MGEA5O60502 916 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 NEURL1O76050 574 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CTSHP09668 335 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 UNGP13051 313 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 SP100P23497 879 aaPredicted RBP1.45□□□□□ -2.18
XRN1-214ENST00000498077 ARNTP27540 789 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 EPHB2P29323 1055 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 ICAM3P32942 547 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 GALCP54803 685 aa1.45□□□□□ -2.18
XRN1-214ENST00000498077 CASP6P55212 293 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms