RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IGKV3D-15A0A087WSY6 115 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 A0A0U1RQF3 1178 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 ASPDHA6ND91 283 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 NDUFB4O95168 129 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 RNF224P0DH78 156 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 KRT2P35908 639 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 RHBDL3P58872 404 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 OS9Q13438 667 aaPredicted RBP3.79□□□□□ -1.8
SMC4-227ENST00000497984 PDCD2Q16342 344 aaPredicted RBP3.79□□□□□ -1.8
SMC4-227ENST00000497984 CBWD5Q5RIA9 395 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 ZNF772Q68DY9 489 aaPredicted RBP3.79□□□□□ -1.8
SMC4-227ENST00000497984 ARHGAP17Q68EM7 881 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 ARHGAP11AQ6P4F7 1023 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 WDR73Q6P4I2 378 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 PRSS45Q7RTY3 260 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 LURAP1LQ8IV03 231 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 ODF3L1Q8IXM7 274 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 PARP16Q8N5Y8 322 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 OTULINQ96BN8 352 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 F2RL3Q96RI0 385 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 BARHL1Q9BZE3 327 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 TWSG1Q9GZX9 223 aa3.79□□□□□ -1.8
SMC4-227ENST00000497984 PDS5AQ29RF7 1337 aaKnown RBP3.78□□□□□ -1.8
SMC4-227ENST00000497984 HSPB2A8KAH6 182 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 CAPN9O14815 690 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 DHX16O60231 1041 aaKnown RBP3.78□□□□□ -1.8
SMC4-227ENST00000497984 ALDH4A1P30038 563 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 STX2P32856 288 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 PITX1P78337 314 aaPredicted RBP3.78□□□□□ -1.8
SMC4-227ENST00000497984 GOLGA8FQ08AF8 430 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 HSPB2Q16082 182 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 CES5AQ6NT32 575 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 IL20RBQ6UXL0 311 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 GFRALQ6UXV0 394 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 B3GNT6Q6ZMB0 384 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 TMEM219Q86XT9 240 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 SLC24A4Q8NFF2 622 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 TRAPPC12Q8WVT3 735 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 THAP4Q8WY91 577 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 RBM17Q96I25 401 aaKnown RBP3.78□□□□□ -1.8
SMC4-227ENST00000497984 RALYQ9UKM9 306 aaKnown RBP3.78□□□□□ -1.8
SMC4-227ENST00000497984 NFE2L3Q9Y4A8 694 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 COMMD10Q9Y6G5 202 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 A3GALT2U3KPV4 340 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 CACNA1FO60840 1977 aa3.78□□□□□ -1.8
SMC4-227ENST00000497984 hCG_1642624A0A1W2PR95 340 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 TYW5A2RUC4 315 aaKnown RBP3.77□□□□□ -1.81
SMC4-227ENST00000497984 KLRF2D3W0D1 207 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 EXTL3O43909 919 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 FAM155BO75949 473 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 BAG4O95429 457 aaKnown RBP3.77□□□□□ -1.81
SMC4-227ENST00000497984 CHRM4P08173 479 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 VEGFAP15692 232 aaPredicted RBP3.77□□□□□ -1.81
SMC4-227ENST00000497984 GPTP24298 496 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 CHATP28329 748 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 HOXC13P31276 330 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 FMO5P49326 533 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 SREBF2Q12772 1141 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 ARHGEF6Q15052 776 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 DENND1BQ6P3S1 775 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 FOXRED2Q8IWF2 684 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 CHERPQ8IWX8 916 aaKnown RBP3.77□□□□□ -1.81
SMC4-227ENST00000497984 MAPK1IP1LQ8NDC0 245 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 VPS37AQ8NEZ2 397 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 GJC3Q8NFK1 279 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 BBS10Q8TAM1 723 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 ANKRD9Q96BM1 317 aaPredicted RBP3.77□□□□□ -1.81
SMC4-227ENST00000497984 CLSTN3Q9BQT9 956 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 LMAN2LQ9H0V9 348 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 CHODLQ9H9P2 273 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 C17orf75Q9HAS0 396 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 PLEKHA5Q9HAU0 1116 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 PCDH9Q9HC56 1237 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 GRHPRQ9UBQ7 328 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 TINAGQ9UJW2 476 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 POU2F3Q9UKI9 436 aa3.77□□□□□ -1.81
SMC4-227ENST00000497984 PMS2P5A8MQ11 134 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 IPO5O00410 1097 aaKnown RBP3.76□□□□□ -1.81
SMC4-227ENST00000497984 KLK8O60259 260 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 ZNF8P17098 575 aaPredicted RBP3.76□□□□□ -1.81
SMC4-227ENST00000497984 IL15P40933 162 aaPredicted RBP3.76□□□□□ -1.81
SMC4-227ENST00000497984 PPIGQ13427 754 aaKnown RBP eCLIP3.76□□□□□ -1.812e-27■■■■■ 81.9
SMC4-227ENST00000497984 CUL4BQ13620 913 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 IRAK1BP1Q5VVH5 260 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 ZNF497Q6ZNH5 498 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 METTL27Q8N6F8 245 aaPredicted RBP3.76□□□□□ -1.81
SMC4-227ENST00000497984 SLC20A1Q8WUM9 679 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 RND1Q92730 232 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 LGALS12Q96DT0 336 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 RASSF1Q9NS23 344 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 TMEM30AQ9NV96 361 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 MCM9Q9NXL9 1143 aa3.76□□□□□ -1.81
SMC4-227ENST00000497984 CISD1Q9NZ45 108 aaKnown RBP3.76□□□□□ -1.81
SMC4-227ENST00000497984 STX16-NPEPL1H3BU86 382 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 STX16O14662 325 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 PRSS1P07477 247 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 ITGA2P17301 1181 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 GRK6P43250 576 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 BLKP51451 505 aa3.75□□□□□ -1.81
SMC4-227ENST00000497984 TRIM14Q14142 442 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms