RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 BTN2A3PQ96KV6 586 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 RBM15Q96T37 977 aaKnown RBP eCLIP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 CTRCQ99895 268 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 C2orf49Q9BVC5 232 aaPredicted RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 TNKS2Q9H2K2 1166 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 C12orf49Q9H741 205 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 APOBEC3GQ9HC16 384 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 LATS2Q9NRM7 1088 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 PGPEP1Q9NXJ5 209 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 TSPAN16Q9UKR8 245 aa9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 ANKHD1Q8IWZ3 2542 aaKnown RBP9.7□□□□□ -0.86
SMARCAL1-213ENST00000496037 H3BQV1 296 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 K7ERQ8 282 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 DPM1O60762 260 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 KATNA1O75449 491 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 TM7SF2O76062 418 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 CBX6O95503 412 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 NADKO95544 446 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 MT-CO1P00395 513 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 HSP90AA1P07900 732 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 FURINP09958 794 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 SETSIPP0DME0 302 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 SNRPBP14678 240 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 ITGA3P26006 1051 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 PPM1FP49593 454 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 DLG4P78352 724 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 FOXD4Q12950 439 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 SEMA5AQ13591 1074 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 NFATC4Q14934 902 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZRSR2Q15696 482 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 FAM26FQ5R3K3 315 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 SPECC1LQ69YQ0 1117 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 KRBA2Q6ZNG9 492 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 DPY19L3Q6ZPD9 716 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 EPM2AIP1Q7L775 607 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 TMEM135Q86UB9 458 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 SLC4A11Q8NBS3 891 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 GOLGA5Q8TBA6 731 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 ALG14Q96F25 216 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 SLC39A13Q96H72 371 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 RPRD1AQ96P16 312 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 DPYSL5Q9BPU6 564 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 TWSG1Q9GZX9 223 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 SLC12A6Q9UHW9 1150 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 ITM2BQ9Y287 266 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZNF451Q9Y4E5 1061 aa9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 TMEM184BQ9Y519 407 aaPredicted RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 PCDHGA9Q9Y5G4 932 aaKnown RBP9.69□□□□□ -0.86
SMARCAL1-213ENST00000496037 CCDC189A1A4V9 331 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 PIK3R2O00459 728 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 IKBKBO14920 756 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 KRT86O43790 486 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 ENDOD1O94919 500 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 F8A1P23610 371 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 RAD23BP54727 409 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 GYS2P54840 703 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 MAP7Q14244 749 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 IRF4Q15306 451 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZNF438Q7Z4V0 828 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 TAC4Q86UU9 113 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 SFTPA2Q8IWL1 248 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 BMPERQ8N8U9 685 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 ATP6V0D2Q8N8Y2 350 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 Q8NA96 180 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 UBA3Q8TBC4 463 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 CXorf40AQ8TE69 158 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 PNPLA2Q96AD5 504 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 PDXPQ96GD0 296 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 HEPHQ9BQS7 1158 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 SPRY4Q9C004 299 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 LRRC27Q9C0I9 530 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 MBNL1Q9NR56 388 aaKnown RBP9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 CISHQ9NSE2 258 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 CROTQ9UKG9 612 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 DCHS2Q6V1P9 2916 aa9.68□□□□□ -0.86
SMARCAL1-213ENST00000496037 CROCCQ5TZA2 2017 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 PIPSLA2A3N6 862 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 SMAD6O43541 496 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 SNAP91O60641 907 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 PPP6R2O75170 966 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 FAM155BO75949 473 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 DLGAP3O95886 979 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 CD19P15391 556 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 CD1CP29017 333 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 CASP14P31944 242 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 GNALP38405 381 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 GPR3P46089 330 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 RGS7P49802 495 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 DNA2P51530 1060 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 MAZP56270 477 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 HDAC4P56524 1084 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 MC2RQ01718 297 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 CDK18Q07002 472 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 NR1D2Q14995 579 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 CHRNA6Q15825 494 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 ZC3H12AQ5D1E8 599 aaKnown RBP9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 NKAIN2Q5VXU1 208 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 SLC6A19Q695T7 634 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 LINGO4Q6UY18 593 aa9.67□□□□□ -0.86
SMARCAL1-213ENST00000496037 IQCKQ8N0W5 287 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms