RNA–Protein interactions for RNA: ENST00000491881.1

VTA1-204, Transcript of vesicle trafficking 1, humanhuman

TSL 2

Gene VTA1, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-204ENST00000491881 HNRNPCL1O60812 293 aaKnown RBP4.03□□□□□ -1.76
VTA1-204ENST00000491881 RNASEH2AO75792 299 aaKnown RBP4.03□□□□□ -1.76
VTA1-204ENST00000491881 NDUFB4O95168 129 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 TOMM40O96008 361 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 LCATP04180 440 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 CD58P19256 250 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 CHATP28329 748 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 CDAP32320 146 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 PBX3P40426 434 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 CASP2P42575 452 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 PMS2P54278 862 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 NAP1L1P55209 391 aaKnown RBP4.03□□□□□ -1.76
VTA1-204ENST00000491881 MAMLD1Q13495 774 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 FRG1Q14331 258 aaKnown RBP4.03□□□□□ -1.76
VTA1-204ENST00000491881 FGFBP1Q14512 234 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 LEXMQ3ZCV2 418 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 WDR78Q5VTH9 848 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 MEPCEQ7L2J0 689 aaKnown RBP4.03□□□□□ -1.76
VTA1-204ENST00000491881 NGEFQ8N5V2 710 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 TMEM116Q8NCL8 245 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 BEST2Q8NFU1 509 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 VPS33BQ9H267 617 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 PLEKHA4Q9H4M7 779 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 KIF9Q9HAQ2 790 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 ASAH2Q9NR71 780 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 EHD2Q9NZN4 543 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 IL36RNQ9UBH0 155 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 PTGDR2Q9Y5Y4 395 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 PSAT1Q9Y617 370 aa4.03□□□□□ -1.76
VTA1-204ENST00000491881 FAM237BA0A1B0GVD1 139 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 A0A1B0GVT2 93 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 CD8B2A6NJW9 211 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 IFNL4K9M1U5 179 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 TAF4O00268 1085 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 RGS14O43566 566 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 KLK8O60259 260 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 TIPRLO75663 272 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 ACADMP11310 421 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 ITGAXP20702 1163 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 AGAP20933 346 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 GPTP24298 496 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 PIP4K2AP48426 406 aaPredicted RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 NUDT6P53370 316 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 PGGT1BP53609 377 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 SORDQ00796 357 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 GPS2Q13227 327 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 EIF4A2Q14240 407 aaKnown RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 MYBPC2Q14324 1141 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 NEDD9Q14511 834 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 DRAP1Q14919 205 aaPredicted RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 MED22Q15528 200 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 COL28A1Q2UY09 1125 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 GPATCH4Q5T3I0 446 aaKnown RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 SNX30Q5VWJ9 437 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 SLC35F3Q8IY50 421 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 ZBTB2Q8N680 514 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 SCCPDHQ8NBX0 429 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 HUS1BQ8NHY5 278 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 ARRDC2Q8TBH0 407 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 NEK9Q8TD19 979 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 ASB5Q8WWX0 329 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 PSPC1Q8WXF1 523 aaKnown RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 TRIB2Q92519 343 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 SNAPC3Q92966 411 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 ERGIC1Q969X5 290 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 MARK4Q96L34 752 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 CHCHD6Q9BRQ6 235 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 DCLK3Q9C098 648 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 PLEKHA5Q9HAU0 1116 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 CLK4Q9HAZ1 481 aaKnown RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 FBRSL1Q9HCM7 1045 aaKnown RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 EIF2B3Q9NR50 452 aaKnown RBP4.02□□□□□ -1.77
VTA1-204ENST00000491881 BLOC1S4Q9NUP1 217 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 PLK2Q9NYY3 685 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 OR6C3Q9NZP0 311 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 DLGAP2Q9P1A6 1054 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 MYO6Q9UM54 1294 aa4.02□□□□□ -1.77
VTA1-204ENST00000491881 A0A1W2PRG0 241 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 FAM90A10PA6NDY2 464 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 PAGE4O60829 102 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 OAZ2O95190 189 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 IPO7O95373 1038 aaKnown RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 MMP2P08253 660 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 LAMP2P13473 410 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 HOXD3P31249 432 aaPredicted RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 SHMT1P34896 483 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 PPARGP37231 505 aaPredicted RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 PIGAP37287 484 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 RPL3P39023 403 aaKnown RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 RFX5P48382 616 aaPredicted RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 ADORA2A-AS1P86434 159 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 CSTF3Q12996 717 aaKnown RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 OLIG2Q13516 323 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 CTTNQ14247 550 aaKnown RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 HNF4GQ14541 408 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 ALG11Q2TAA5 492 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 TYW3Q6IPR3 259 aaKnown RBP4.01□□□□□ -1.77
VTA1-204ENST00000491881 ZNF549Q6P9A3 640 aa4.01□□□□□ -1.77
VTA1-204ENST00000491881 NCEH1Q6PIU2 408 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms