RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 KIAA2013Q8IYS2 634 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 SPATA5Q8NB90 893 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 STAMQ92783 540 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 ZC3HAV1LQ96H79 300 aaKnown RBP3.8□□□□□ -1.8
HMGN1-218ENST00000490032 PGLYRP2Q96PD5 576 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 EYA3Q99504 573 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 EPYCQ99645 322 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 MXRA8Q9BRK3 442 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 PYM1Q9BRP8 204 aaKnown RBP3.8□□□□□ -1.8
HMGN1-218ENST00000490032 C1RLQ9NZP8 487 aa3.8□□□□□ -1.8
HMGN1-218ENST00000490032 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGN1-218ENST00000490032 A0A0G2JPF8 293 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 FAM172BPA6NC97 362 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 HNRNPCL3B7ZW38 293 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 HNRNPCL1O60812 293 aaKnown RBP3.79□□□□□ -1.8
HMGN1-218ENST00000490032 HNRNPCL4P0DMR1 293 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 GPD2P43304 727 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 HILS1P60008 231 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 OS9Q13438 667 aaPredicted RBP3.79□□□□□ -1.8
HMGN1-218ENST00000490032 NEDD9Q14511 834 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 SYT16Q17RD7 645 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 ZNF667Q5HYK9 610 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 PMS2CLQ68D20 193 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 B3GNT6Q6ZMB0 384 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 MARK2Q7KZI7 788 aaKnown RBP3.79□□□□□ -1.8
HMGN1-218ENST00000490032 ADGRG6Q86SQ4 1221 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 SFR1Q86XK3 245 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 SCCPDHQ8NBX0 429 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 AGBL3Q8NEM8 1001 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 RUFY2Q8WXA3 655 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 TMEM19Q96HH6 336 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 ISCA1Q9BUE6 129 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 C17orf75Q9HAS0 396 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 PCDH9Q9HC56 1237 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 DDX4Q9NQI0 724 aaKnown RBP3.79□□□□□ -1.8
HMGN1-218ENST00000490032 KLHL1Q9NR64 748 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 SNTG1Q9NSN8 517 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 KIAA1456Q9P272 454 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 PEMTQ9UBM1 199 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 PCDHGB3Q9Y5G1 929 aa3.79□□□□□ -1.8
HMGN1-218ENST00000490032 P2RY10O00398 339 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 TCEA3O75764 348 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 CGAP01215 116 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 CRYAAP02489 173 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 HEXAP06865 529 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 MMP2P08253 660 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 AGAP20933 346 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 FUT6P51993 359 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 SLC12A1Q13621 1099 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 CCDC6Q16204 474 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 ANKRD54Q6NXT1 300 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 CCNI2Q6ZMN8 369 aaPredicted RBP3.78□□□□□ -1.8
HMGN1-218ENST00000490032 MTSS1LQ765P7 747 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 NOXA1Q86UR1 476 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 TMTC1Q8IUR5 882 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 FOXRED2Q8IWF2 684 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 CHERPQ8IWX8 916 aaKnown RBP3.78□□□□□ -1.8
HMGN1-218ENST00000490032 KBTBD3Q8NAB2 608 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 TNIP2Q8NFZ5 429 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 MAGEC3Q8TD91 643 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 FBXL8Q96CD0 374 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 ELP4Q96EB1 424 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 TTC14Q96N46 770 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 HAUS8Q9BT25 410 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 ESRP2Q9H6T0 727 aaKnown RBP3.78□□□□□ -1.8
HMGN1-218ENST00000490032 PTPRHQ9HD43 1115 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 BABAM1Q9NWV8 329 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 MCM9Q9NXL9 1143 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 IL1RAPL1Q9NZN1 696 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 ZNF711Q9Y462 761 aa3.78□□□□□ -1.8
HMGN1-218ENST00000490032 A0A1W2PS18 150 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 TEX22C9J3V5 150 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 NBNO60934 754 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 PAK4O96013 591 aaPredicted RBP3.77□□□□□ -1.81
HMGN1-218ENST00000490032 LDHAP00338 332 aaKnown RBP3.77□□□□□ -1.81
HMGN1-218ENST00000490032 ETFAP13804 333 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 EDN2P20800 178 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 RAD23BP54727 409 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 DMP1Q13316 513 aaPredicted RBP3.77□□□□□ -1.81
HMGN1-218ENST00000490032 ITGADQ13349 1161 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 TAF11Q15544 211 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 SGO1Q5FBB7 561 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 LRRC8EQ6NSJ5 796 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 ADAM5Q6NVV9 412 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 WDR73Q6P4I2 378 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.77□□□□□ -1.81
HMGN1-218ENST00000490032 TADA2BQ86TJ2 420 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 PLD5Q8N7P1 536 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 KCNH5Q8NCM2 988 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 C11orf65Q8NCR3 313 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 PPM1EQ8WY54 764 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 USP13Q92995 863 aaPredicted RBP3.77□□□□□ -1.81
HMGN1-218ENST00000490032 RPS6KC1Q96S38 1066 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 LRRC4Q9HBW1 653 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 MKKSQ9NPJ1 570 aaPredicted RBP3.77□□□□□ -1.81
HMGN1-218ENST00000490032 CNGB3Q9NQW8 809 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 TINAGQ9UJW2 476 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 COMMD10Q9Y6G5 202 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 STON1Q9Y6Q2 735 aa3.77□□□□□ -1.81
HMGN1-218ENST00000490032 NOTCH3Q9UM47 2321 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms