RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 NGFRP08138 427 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 CAPN3P20807 821 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 CDAP32320 146 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TTKP33981 857 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 PPP3CCP48454 512 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TFAP4Q01664 338 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 LRMPQ12912 555 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TRAF2Q12933 501 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 NEDD9Q14511 834 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 LPIN1Q14693 890 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 ASIC2Q16515 512 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 FSCBQ5H9T9 825 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 MZT2BQ6NZ67 158 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 SARM1Q6SZW1 724 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TRILQ7L0X0 811 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 PCGF5Q86SE9 256 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TBC1D1Q86TI0 1168 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TRIM74Q86UV6 250 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TRIM73Q86UV7 250 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 RPAP2Q8IXW5 612 aaPredicted RBP3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TEX11Q8IYF3 940 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 C1orf131Q8NDD1 294 aaKnown RBP3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 BEST2Q8NFU1 509 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 IGFBPL1Q8WX77 278 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 INTS12Q96CB8 462 aaKnown RBP3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 CCDC34Q96HJ3 373 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 MAP7D2Q96T17 732 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 PIP5K1AQ99755 562 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM204Q9BSN7 226 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 NPFFR1Q9GZQ6 430 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 MVB12BQ9H7P6 319 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 PLEKHA5Q9HAU0 1116 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 ASAH2Q9NR71 780 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 CTNNAL1Q9UBT7 734 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 MTMR6Q9Y217 621 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 SCINQ9Y6U3 715 aa3.89□□□□□ -1.79
HMGB1P36-201ENST00000487709 FSD2A1L4K1 749 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 NPIPB15A6NHN6 443 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 HSPB2A8KAH6 182 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 KLRF2D3W0D1 207 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 LIASO43766 372 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 ATG13O75143 517 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 NDUFS3O75489 264 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 TSPAN9O75954 239 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 LAMP2P13473 410 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 ETFAP13804 333 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 DCTDP32321 178 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 RYKP34925 604 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 ROR2Q01974 943 aaKnown RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 DSC1Q08554 894 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 PRKG2Q13237 762 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 OLIG2Q13516 323 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 SIM2Q14190 667 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 FRG1Q14331 258 aaKnown RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 DRAP1Q14919 205 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 HSPB2Q16082 182 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 DUSP6Q16828 381 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 ESCO2Q56NI9 601 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 PRAMEF19Q5SWL8 479 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM71Q6P5X7 295 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 TSSK4Q6SA08 328 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 NR2C2APQ86WQ0 139 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 TDRPQ86YL5 185 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 MB21D2Q8IYB1 491 aaPredicted RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 PARP16Q8N5Y8 322 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 TEX45Q8NA69 505 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 MIGA1Q8NAN2 632 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 SGCDQ92629 289 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 ARHGEF2Q92974 986 aaKnown RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM68Q96MH6 324 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 HEMGNQ9BXL5 484 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 MAK16Q9BXY0 300 aaKnown RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 IFIH1Q9BYX4 1025 aaKnown RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 MUC13Q9H3R2 512 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 KAT14Q9H8E8 782 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 FBRSL1Q9HCM7 1045 aaKnown RBP3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 PCDHB16Q9NRJ7 776 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 HCFC1R1Q9NWW0 138 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 A3GALT2U3KPV4 340 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 ADGRF5Q8IZF2 1346 aa3.88□□□□□ -1.79
HMGB1P36-201ENST00000487709 MYO1GB0I1T2 1018 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SEC14L5O43304 696 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SLC25A12O75746 678 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 NAGAP17050 411 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM11P17152 192 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SRD5A1P18405 259 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 TNFRSF8P28908 595 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 PGGT1BP53609 377 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 RAD23BP54727 409 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 CLDN2P57739 230 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 SELENOVP59797 346 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 TMEM115Q12893 351 aaPredicted RBP3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 CSTF3Q12996 717 aaKnown RBP3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 C6orf141Q5SZD1 244 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 PDXDC1Q6P996 788 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 NCEH1Q6PIU2 408 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 LCTLQ6UWM7 567 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 PXKQ7Z7A4 578 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 GPSM1Q86YR5 675 aa3.87□□□□□ -1.79
HMGB1P36-201ENST00000487709 TICAM1Q8IUC6 712 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms