RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 RXRAP19793 462 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 HNF1BP35680 557 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 TMPOP42166 694 aaKnown RBP3.1□□□□□ -1.91
HPS3-205ENST00000478525 DSCR10P59022 87 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 KRT72Q14CN4 511 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 ARHGEF6Q15052 776 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 KCNT1Q5JUK3 1230 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 CCDC181Q5TID7 509 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 IL31Q6EBC2 164 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 CEACAM20Q6UY09 585 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 KSR2Q6VAB6 950 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 ZNF852Q6ZMS4 543 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 NOTCH2NLQ7Z3S9 236 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 ATG16L2Q8NAA4 619 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 HSPH1Q92598 858 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 RNFT2Q96EX2 444 aa3.1□□□□□ -1.91
HPS3-205ENST00000478525 CISD1Q9NZ45 108 aaKnown RBP3.1□□□□□ -1.91
HPS3-205ENST00000478525 FAF1Q9UNN5 650 aaPredicted RBP3.1□□□□□ -1.91
HPS3-205ENST00000478525 DVL1O14640 695 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 SKAP2O75563 359 aaPredicted RBP3.09□□□□□ -1.91
HPS3-205ENST00000478525 USP8P40818 1118 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 NEK3P51956 506 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 RBM5P52756 815 aaKnown RBP eCLIP3.09□□□□□ -1.91
HPS3-205ENST00000478525 DVL1P1P54792 670 aaPredicted RBP3.09□□□□□ -1.91
HPS3-205ENST00000478525 BTKQ06187 659 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 SLC18A3Q16572 532 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 SLC35E4Q6ICL7 350 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 KRBA2Q6ZNG9 492 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 KCTD8Q6ZWB6 473 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 KMT5CQ86Y97 462 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 FOXRED2Q8IWF2 684 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 CHERPQ8IWX8 916 aaKnown RBP3.09□□□□□ -1.91
HPS3-205ENST00000478525 GJC3Q8NFK1 279 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 DUSP19Q8WTR2 217 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 MASTLQ96GX5 879 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 TNIP3Q96KP6 325 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 KXD1Q9BQD3 176 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 HAUS8Q9BT25 410 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 TTC12Q9H892 705 aaPredicted RBP3.09□□□□□ -1.91
HPS3-205ENST00000478525 ARFGAP3Q9NP61 516 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 TMEM30AQ9NV96 361 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 MCM9Q9NXL9 1143 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.09□□□□□ -1.91
HPS3-205ENST00000478525 CD207Q9UJ71 328 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 A3GALT2U3KPV4 340 aa3.09□□□□□ -1.91
HPS3-205ENST00000478525 IGKV6D-41A0A0C4DH26 115 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 KLRF2D3W0D1 207 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 INHBAP08476 426 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 GPTP24298 496 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 CHATP28329 748 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 PRKAA2P54646 552 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 SEC61BP60468 96 aaKnown RBP3.08□□□□□ -1.92
HPS3-205ENST00000478525 RUNX2Q13950 521 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 HLTFQ14527 1009 aaKnown RBP eCLIP3.08□□□□□ -1.92
HPS3-205ENST00000478525 KRTAP13-3Q3SY46 172 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 MMEL1Q495T6 779 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 XRRA1Q6P2D8 792 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 IL20RBQ6UXL0 311 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 WDR63Q8IWG1 891 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 C1orf87Q8N0U7 546 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 CSGALNACT1Q8TDX6 532 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 GOLGA1Q92805 767 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 SNAPC3Q92966 411 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 ABTB1Q969K4 478 aaPredicted RBP3.08□□□□□ -1.92
HPS3-205ENST00000478525 CDCA5Q96FF9 252 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 LRRC1Q9BTT6 524 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 PCDH9Q9HC56 1237 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 CNGB3Q9NQW8 809 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 FAM118AQ9NWS6 357 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 PCDHGB5Q9Y5G0 923 aa3.08□□□□□ -1.92
HPS3-205ENST00000478525 HMX3A6NHT5 357 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 BLOC1S5-TXNDC5H3BN57 136 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 ZNF8P17098 575 aaPredicted RBP3.07□□□□□ -1.92
HPS3-205ENST00000478525 S1PR1P21453 382 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 MCM2P49736 904 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 LUMP51884 338 aaPredicted RBP3.07□□□□□ -1.92
HPS3-205ENST00000478525 GNB1P62873 340 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 GOLGA8FQ08AF8 430 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 CTF1Q16619 201 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 PDSS1Q5T2R2 415 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 BSPRYQ5W0U4 402 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 PGBD2Q6P3X8 592 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 STXBP4Q6ZWJ1 553 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 PRSS45Q7RTY3 260 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 RBM17Q96I25 401 aaKnown RBP3.07□□□□□ -1.92
HPS3-205ENST00000478525 C8orf48Q96LL4 319 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 RMDN3Q96TC7 470 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 ASCL2Q99929 193 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 TAF1DQ9H5J8 278 aaPredicted RBP3.07□□□□□ -1.92
HPS3-205ENST00000478525 TMEM160Q9NX00 188 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 PADI1Q9ULC6 663 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 AMDHD2Q9Y303 409 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 NFE2L3Q9Y4A8 694 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 PRSS21Q9Y6M0 314 aa3.07□□□□□ -1.92
HPS3-205ENST00000478525 AKR1B15C9JRZ8 316 aaPredicted RBP3.06□□□□□ -1.92
HPS3-205ENST00000478525 KLK8O60259 260 aa3.06□□□□□ -1.92
HPS3-205ENST00000478525 TNNT1P13805 278 aa3.06□□□□□ -1.92
HPS3-205ENST00000478525 TAF1P21675 1872 aa3.06□□□□□ -1.92
HPS3-205ENST00000478525 KRTAP12-2P59991 146 aa3.06□□□□□ -1.92
HPS3-205ENST00000478525 KRTAP10-8P60410 259 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms