RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 CPEB1Q9BZB8 566 aaKnown RBP12.31□□□□□ -0.44
MRPL55-227ENST00000475832 TNKS2Q9H2K2 1166 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 TRABDQ9H4I3 376 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 HPS4Q9NQG7 708 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 LIMD1Q9UGP4 676 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 TBK1Q9UHD2 729 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 PCDHB9Q9Y5E1 797 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 MYO15AQ9UKN7 3530 aa12.31□□□□□ -0.44
MRPL55-227ENST00000475832 NUP205Q92621 2012 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 DCHS1Q96JQ0 3298 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 A6NNZ2 444 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 ANKRD66B4E2M5 251 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 ANHXE9PGG2 379 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 NR1D1P20393 614 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 GJA4P35212 333 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 GRIA2P42262 883 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 PRAMEP78395 509 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 KDSRQ06136 332 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 TRAF2Q12933 501 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 TAF1AQ15573 450 aaPredicted RBP12.3□□□□□ -0.44
MRPL55-227ENST00000475832 TUBB8Q3ZCM7 444 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 FNDC3BQ53EP0 1204 aaKnown RBP12.3□□□□□ -0.44
MRPL55-227ENST00000475832 DGKKQ5KSL6 1271 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 TSTD2Q5T7W7 516 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 KIAA0930Q6ICG6 404 aaPredicted RBP12.3□□□□□ -0.44
MRPL55-227ENST00000475832 CES3Q6UWW8 571 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 MARK2Q7KZI7 788 aaKnown RBP12.3□□□□□ -0.44
MRPL55-227ENST00000475832 DGLUCYQ7Z3D6 616 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 GLT6D1Q7Z4J2 308 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 TERB1Q8NA31 727 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 STYXQ8WUJ0 223 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 FGF14Q92915 247 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 LRIG1Q96JA1 1093 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 SMC6Q96SB8 1091 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 HEPHQ9BQS7 1158 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 OSBPL1AQ9BXW6 950 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 PLA2G2FQ9BZM2 168 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 ZDHHC6Q9H6R6 413 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
MRPL55-227ENST00000475832 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 RIMKLBQ9ULI2 386 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 SORCS3Q9UPU3 1222 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 ACTL7BQ9Y614 415 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 NUMBLQ9Y6R0 609 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 SHROOM3Q8TF72 1996 aa12.3□□□□□ -0.44
MRPL55-227ENST00000475832 ZCWPW2A0A1B0GU75 182 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 NPC1O15118 1278 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 PFDN6O15212 129 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 GJB3O75712 270 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 PGLSO95336 258 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 MT-ND3P03897 115 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 SNRPAP09012 282 aaKnown RBP12.29□□□□□ -0.44
MRPL55-227ENST00000475832 NMBRP28336 390 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 HPDP32754 393 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-227ENST00000475832 SPRP35270 261 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-227ENST00000475832 SLC6A11P48066 632 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 CCNHP51946 323 aaPredicted RBP12.29□□□□□ -0.44
MRPL55-227ENST00000475832 NUBP1P53384 320 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 DNAJC3Q13217 504 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 HTR4Q13639 388 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 GRTP1Q5TC63 336 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 TRMT10BQ6PF06 316 aaKnown RBP12.29□□□□□ -0.44
MRPL55-227ENST00000475832 GDPD4Q6W3E5 623 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 DSG4Q86SJ6 1040 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 UBALD2Q8IYN6 164 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 OTUD6BQ8N6M0 293 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 TTC8Q8TAM2 541 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 CYB5D2Q8WUJ1 264 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 PTPRN2Q92932 1015 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 TLCD1Q96CP7 247 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 MFSD3Q96ES6 412 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 CNTNAP3BQ96NU0 1288 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 CPNE1Q99829 537 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 DHRS4Q9BTZ2 278 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 CNTNAP3Q9BZ76 1288 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 SUV39H2Q9H5I1 410 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 SLCO3A1Q9UIG8 710 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 PHTF1Q9UMS5 762 aa12.29□□□□□ -0.44
MRPL55-227ENST00000475832 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
MRPL55-227ENST00000475832 MYO10Q9HD67 2058 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 EDDM13A0A1B0GTR0 161 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 MROH6A6NGR9 719 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 WASH3PC4AMC7 463 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 TRIM24O15164 1050 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 SLC7A4O43246 635 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 HTRA2O43464 458 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 FZD6O60353 706 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 KAT7O95251 611 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 VAPBO95292 243 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 ASGR2P07307 311 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 ERVK-10P10266 1014 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 LPOP22079 712 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 XPAP23025 273 aaPredicted RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 GP5P40197 560 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 HADHAP40939 763 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
MRPL55-227ENST00000475832 PPP2R2AP63151 447 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 SIGLEC14Q08ET2 396 aa12.28□□□□□ -0.44
MRPL55-227ENST00000475832 EFTUD2Q15029 972 aaKnown RBP eCLIP12.28□□□□□ -0.441e-12■■■■■ 43.4
MRPL55-227ENST00000475832 CNGA3Q16281 694 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms