RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 TMEM5Q9Y2B1 443 aa6.43□□□□□ -1.38
SEC22A-204ENST00000473494 LSM4Q9Y4Z0 139 aaKnown RBP6.43□□□□□ -1.38
SEC22A-204ENST00000473494 PASKQ96RG2 1323 aa6.43□□□□□ -1.38
SEC22A-204ENST00000473494 B4DLN1 442 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 EPN2O95208 641 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 STARD3NLO95772 234 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 MMP2P08253 660 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 GABRB1P18505 474 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 MYF6P23409 242 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 MCM3P25205 808 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 ALDH7A1P49419 539 aaKnown RBP6.42□□□□□ -1.38
SEC22A-204ENST00000473494 SELENOVP59797 346 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 KRT24Q2M2I5 525 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 SOWAHAQ2M3V2 549 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 RAB41Q5JT25 222 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 LCE5AQ5TCM9 118 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 ZCCHC9Q8N567 271 aaKnown RBP6.42□□□□□ -1.38
SEC22A-204ENST00000473494 LSMEM1Q8N8F7 131 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 C16orf52Q8NHV5 167 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 HUS1BQ8NHY5 278 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 TMEM174Q8WUU8 243 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 SLC35F5Q8WV83 523 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 CALML4Q96GE6 196 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 CCDC34Q96HJ3 373 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 SLC41A2Q96JW4 573 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 FAM110AQ9BQ89 295 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 C1QTNF5Q9BXJ0 243 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 MAK16Q9BXY0 300 aaKnown RBP6.42□□□□□ -1.38
SEC22A-204ENST00000473494 NKIRAS2Q9NYR9 191 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 PCDHGB4Q9UN71 923 aa6.42□□□□□ -1.38
SEC22A-204ENST00000473494 NKX2-2O95096 273 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 TFPIP10646 304 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 ZNF182P17025 639 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-204ENST00000473494 GNLYP22749 145 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 CD38P28907 300 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 LAMB3Q13751 1172 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 PCGF3Q3KNV8 242 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 ZNF626Q68DY1 528 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 PLEKHA7Q6IQ23 1121 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 PARM1Q6UWI2 310 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 SEPT14Q6ZU15 432 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 LINGO2Q7L985 606 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 TRAPPC11Q7Z392 1133 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 ZBTB2Q8N680 514 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 ARFGAP1Q8N6T3 406 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 TMEM68Q96MH6 324 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 TMEM47Q9BQJ4 181 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 SMARCAD1Q9H4L7 1026 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 CYSLTR2Q9NS75 346 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 TRNAU1APQ9NX07 287 aaKnown RBP6.41□□□□□ -1.38
SEC22A-204ENST00000473494 TUBA8Q9NY65 449 aaPredicted RBP6.41□□□□□ -1.38
SEC22A-204ENST00000473494 PTGFRNQ9P2B2 879 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 HEY2Q9UBP5 337 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 ZNF804BA4D1E1 1349 aa6.41□□□□□ -1.38
SEC22A-204ENST00000473494 CHL1O00533 1208 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 SLC25A12O75746 678 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 RB1P06400 928 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 AKR1B1P15121 316 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 FBLP22087 321 aaKnown RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 HOXA13P31271 388 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 SRSF4Q08170 494 aaKnown RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 STK4Q13043 487 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 SMN1Q16637 294 aaKnown RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 DCAF6Q58WW2 860 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 SYCE2Q6PIF2 218 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 SHC4Q6S5L8 630 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 SRRM1Q8IYB3 904 aaKnown RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 GABPB2Q8TAK5 448 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 MXD3Q9BW11 206 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 RANGRFQ9HD47 186 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 FZD3Q9NPG1 666 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 DECR2Q9NUI1 292 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 SUCLA2Q9P2R7 463 aaPredicted RBP6.4□□□□□ -1.38
SEC22A-204ENST00000473494 BTBD3Q9Y2F9 522 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 NFE2L3Q9Y4A8 694 aa6.4□□□□□ -1.38
SEC22A-204ENST00000473494 FAM237AA0A1B0GTK4 181 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 BTBD18B2RXH4 712 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 LDB2O43679 373 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 NDUFB4O95168 129 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 NDUFB8O95169 186 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 FGBP02675 491 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 FGF2P09038 288 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 NR2F1P10589 423 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 IL7RP16871 459 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 TNFRSF1BP20333 461 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 ST3GAL1Q11201 340 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 BECN1Q14457 450 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 ARHGEF6Q15052 776 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 RBMS2Q15434 407 aaKnown RBP6.39□□□□□ -1.39
SEC22A-204ENST00000473494 ADIPOQQ15848 244 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 ZNF284Q2VY69 593 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 HIST2H2BCQ6DN03 193 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 HIST2H2BDQ6DRA6 164 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 FBXO46Q6PJ61 603 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-204ENST00000473494 CFAP77Q6ZQR2 320 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 SLC16A12Q6ZSM3 486 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 C17orf53Q8N3J3 647 aaPredicted RBP6.39□□□□□ -1.39
SEC22A-204ENST00000473494 GPT2Q8TD30 523 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 PPP1R13BQ96KQ4 1090 aa6.39□□□□□ -1.39
SEC22A-204ENST00000473494 ZBTB40Q9NUA8 1239 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms