RNA–Protein interactions for RNA: ENST00000469878.5

EFNA1-203, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,288 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-203ENST00000469878 POLNQ7Z5Q5 900 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 HCAR2Q8TDS4 363 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 OR1E3Q8WZA6 343 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 HIC2Q96JB3 615 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 FCRL3Q96P31 734 aaPredicted RBP13.58□□□□□ -0.24
EFNA1-203ENST00000469878 CSPG4P5Q96PW8 444 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 EIF3CQ99613 913 aaKnown RBP13.58□□□□□ -0.24
EFNA1-203ENST00000469878 CCDC3Q9BQI4 270 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
EFNA1-203ENST00000469878 LGR4Q9BXB1 951 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 FGF22Q9HCT0 170 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 ASCL3Q9NQ33 180 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 GULP1Q9UBP9 304 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 KLQ9UEF7 1012 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 SCINQ9Y6U3 715 aa13.58□□□□□ -0.24
EFNA1-203ENST00000469878 A0A0U1RQS6 177 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 RRP8O43159 456 aaKnown RBP13.57□□□□□ -0.24
EFNA1-203ENST00000469878 CD48P09326 243 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 ELFN1P0C7U0 828 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 PCK1P35558 622 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 HCAR3P49019 387 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 SRP54P61011 504 aaKnown RBP13.57□□□□□ -0.24
EFNA1-203ENST00000469878 MAXP61244 160 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 FANCCQ00597 558 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 SLC25A11Q02978 314 aaKnown RBP13.57□□□□□ -0.24
EFNA1-203ENST00000469878 BCL2L1Q07817 233 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 TRAF2Q12933 501 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 MMRN1Q13201 1228 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 GRM3Q14832 879 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 AGERQ15109 404 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 DPPA4Q7L190 304 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 B3GNT8Q7Z7M8 397 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 PSTKQ8IV42 348 aaKnown RBP13.57□□□□□ -0.24
EFNA1-203ENST00000469878 CCDC74AQ96AQ1 378 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 PRR11Q96HE9 360 aaPredicted RBP13.57□□□□□ -0.24
EFNA1-203ENST00000469878 TBATAQ96M53 351 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 SMIM14Q96QK8 99 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 PSKH2Q96QS6 385 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 LGMNQ99538 433 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 EDEM3Q9BZQ6 932 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 POLR1BQ9H9Y6 1135 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 B4GALT6Q9UBX8 382 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 PADI4Q9UM07 663 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 PCDHGC4Q9Y5F7 938 aa13.57□□□□□ -0.24
EFNA1-203ENST00000469878 A0A087X0T9 212 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 H3BRJ5 948 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 TOR1BO14657 336 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 MAFKO60675 156 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 RASGRP1O95267 797 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 FAM228BP0C875 321 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 MYBL1P10243 752 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 CR2P20023 1033 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 LHCGRP22888 699 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 LSSP48449 732 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 PEX5P50542 639 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 PCBP4P57723 403 aaKnown RBP13.56□□□□□ -0.24
EFNA1-203ENST00000469878 MTM1Q13496 603 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 TMCO4Q5TGY1 634 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 FOXR1Q6PIV2 292 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 RBM44Q6ZP01 1051 aaKnown RBP13.56□□□□□ -0.24
EFNA1-203ENST00000469878 FSTL5Q8N475 847 aaPredicted RBP13.56□□□□□ -0.24
EFNA1-203ENST00000469878 PAF1Q8N7H5 531 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 ARL10Q8N8L6 244 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 CCL4L1Q8NHW4 92 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 PDCD6IPQ8WUM4 868 aaKnown RBP13.56□□□□□ -0.24
EFNA1-203ENST00000469878 LRRN4Q8WUT4 740 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 PTCD2Q8WV60 388 aaKnown RBP13.56□□□□□ -0.24
EFNA1-203ENST00000469878 CPLX3Q8WVH0 158 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 TRIM11Q96F44 468 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 WDR92Q96MX6 357 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 NUP85Q9BW27 656 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 NOD2Q9HC29 1040 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 PCDH18Q9HCL0 1135 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 EVA1BQ9NVM1 165 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 NCKIPSDQ9NZQ3 722 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 SEPT3Q9UH03 358 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 ANAPC7Q9UJX3 599 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 DOLKQ9UPQ8 538 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 BPTFQ12830 3046 aa13.56□□□□□ -0.24
EFNA1-203ENST00000469878 FASNP49327 2511 aaKnown RBP13.56□□□□□ -0.24
EFNA1-203ENST00000469878 A0A1W2PQM1 296 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 AGRPO00253 132 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 DXOO77932 396 aaKnown RBP13.55□□□□□ -0.24
EFNA1-203ENST00000469878 MAP3K6O95382 1288 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 CTSEP14091 401 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 HTR1BP28222 390 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 GJC1P36383 396 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 KIAA1024LP59773 190 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 AP1S1P61966 158 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 CXADRP78310 365 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 NSUN2Q08J23 767 aaKnown RBP eCLIP13.55□□□□□ -0.24
EFNA1-203ENST00000469878 ZNF235Q14590 738 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 RFTN1Q14699 578 aaPredicted RBP13.55□□□□□ -0.24
EFNA1-203ENST00000469878 ACAP1Q15027 740 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 ACOX1Q15067 660 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 CNGA3Q16281 694 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 ATP13A4Q4VNC1 1196 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 FIGNQ5HY92 759 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 DENND2CQ68D51 928 aa13.55□□□□□ -0.24
EFNA1-203ENST00000469878 TMCO3Q6UWJ1 677 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms