RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 G6PDP11413 515 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 CHATP28329 748 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 ABCD1P33897 745 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 TUBP50607 506 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 RARSP54136 660 aaKnown RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 RNPS1Q15287 305 aaKnown RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 CALCRLQ16602 461 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 FBXO46Q6PJ61 603 aaPredicted RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 RHBDF2Q6PJF5 856 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 B3GNT6Q6ZMB0 384 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 MMS22LQ6ZRQ5 1243 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 H1FNTQ75WM6 255 aaPredicted RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 NR2C2APQ86WQ0 139 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 ARMC8Q8IUR7 673 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 SLC35F3Q8IY50 421 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 ZBTB2Q8N680 514 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 PABPC5Q96DU9 382 aaKnown RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 LRFN5Q96NI6 719 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 CSF3RQ99062 836 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 H2AFJQ9BTM1 129 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 PDCL3Q9H2J4 239 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 RETREG1Q9H6L5 497 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 MAGEE1Q9HCI5 957 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 UBN1Q9NPG3 1134 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 NOX4Q9NPH5 578 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 GPR108Q9NPR9 543 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 IRAK4Q9NWZ3 460 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 PPP1R14DQ9NXH3 145 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 PDP2Q9P2J9 529 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 SLC25A10Q9UBX3 287 aaPredicted RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 SLC9A2Q9UBY0 812 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 A4GNTQ9UNA3 340 aa3.25□□□□□ -1.89
TPR-204ENST00000469463 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.25□□□□□ -1.89
TPR-204ENST00000469463 AAR2Q9Y312 384 aaKnown RBP3.25□□□□□ -1.89
TPR-204ENST00000469463 IGLV5-52A0A0A0MRZ9 124 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 LOC102724159A0A0B4J2E5 919 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 DENND3A2RUS2 1198 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 NPIPB11E5RHQ5 1161 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 CLGNO14967 610 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 F9P00740 461 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 TFP02787 698 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 HEXAP06865 529 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 ATP1A3P13637 1013 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 SSTR2P30874 369 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 STX2P32856 288 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 ARL1P40616 181 aaPredicted RBP3.24□□□□□ -1.89
TPR-204ENST00000469463 EIF2S3P41091 472 aaKnown RBP3.24□□□□□ -1.89
TPR-204ENST00000469463 COMPP49747 757 aaPredicted RBP3.24□□□□□ -1.89
TPR-204ENST00000469463 ADORA2A-AS1P86434 159 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 TRAF3Q13114 568 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 SNTA1Q13424 505 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 PWP2Q15269 919 aaKnown RBP3.24□□□□□ -1.89
TPR-204ENST00000469463 COL28A1Q2UY09 1125 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 EIF2S3LQ2VIR3 472 aaKnown RBP3.24□□□□□ -1.89
TPR-204ENST00000469463 SLC45A4Q5BKX6 768 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 GFI1BQ5VTD9 330 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 WDR73Q6P4I2 378 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 ATF7IPQ6VMQ6 1270 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 SLC36A4Q6YBV0 504 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 CCDC129Q6ZRS4 1044 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 CCDC13Q8IYE1 715 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 CLIP4Q8N3C7 705 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 BEST2Q8NFU1 509 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 NFKBIDQ8NI38 313 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 CREB3L4Q8TEY5 395 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 SECTM1Q8WVN6 248 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 SMARCE1Q969G3 411 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 C3orf30Q96M34 536 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 TBATAQ96M53 351 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 SLC26A6Q9BXS9 759 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 NDST4Q9H3R1 872 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 CD93Q9NPY3 652 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 PCDHB16Q9NRJ7 776 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 MKLN1Q9UL63 735 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 NFS1Q9Y697 457 aa3.24□□□□□ -1.89
TPR-204ENST00000469463 PRSS47A8MTI9 375 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 IFNL4K9M1U5 179 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 HSPA12AO43301 675 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 SEC31AO94979 1220 aaKnown RBP3.23□□□□□ -1.89
TPR-204ENST00000469463 CYC1P08574 325 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 IL7RP16871 459 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 ITGAXP20702 1163 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 GPTP24298 496 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 EIF3BP55884 814 aaKnown RBP3.23□□□□□ -1.89
TPR-204ENST00000469463 SEC61A1P61619 476 aaKnown RBP3.23□□□□□ -1.89
TPR-204ENST00000469463 TUBA1BP68363 451 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 BNC1Q01954 994 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 G3BP1Q13283 466 aaKnown RBP eCLIP3.23□□□□□ -1.89
TPR-204ENST00000469463 KEAP1Q14145 624 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 SF3B4Q15427 424 aaKnown RBP eCLIP3.23□□□□□ -1.89
TPR-204ENST00000469463 BAK1Q16611 211 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 CTF1Q16619 201 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 ATP13A5Q4VNC0 1218 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 PAPPA-AS1Q5QFB9 102 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 JAKMIP3Q5VZ66 844 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 C9orf57Q5W0N0 161 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 ACAD10Q6JQN1 1059 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 GSTA5Q7RTV2 222 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 PGBD5Q8N414 524 aa3.23□□□□□ -1.89
TPR-204ENST00000469463 NEXN-AS1Q8NBZ9 246 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms