RNA–Protein interactions for RNA: ENST00000469463.1

TPR-204, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5

Gene TPR, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-204ENST00000469463 AEBP2Q6ZN18 517 aaPredicted RBP21.16■□□□□ 0.98
TPR-204ENST00000469463 CHIC1Q5VXU3 224 aa20.2■□□□□ 0.82
TPR-204ENST00000469463 SENP3Q9H4L4 574 aaPredicted RBP18.18■□□□□ 0.5
TPR-204ENST00000469463 PHF23Q9BUL5 403 aaPredicted RBP17.87■□□□□ 0.45
TPR-204ENST00000469463 FOXD1Q16676 465 aa16.84■□□□□ 0.29
TPR-204ENST00000469463 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
TPR-204ENST00000469463 MSH5O43196 834 aa15.87■□□□□ 0.13
TPR-204ENST00000469463 PIAS4Q8N2W9 510 aaPredicted RBP15.79■□□□□ 0.12
TPR-204ENST00000469463 PPP6R1Q9UPN7 881 aa15.72■□□□□ 0.11
TPR-204ENST00000469463 ADRA2BP18089 450 aa15.68■□□□□ 0.1
TPR-204ENST00000469463 POTEDQ86YR6 584 aa15.34■□□□□ 0.05
TPR-204ENST00000469463 SCAF1Q9H7N4 1312 aaKnown RBP14.51□□□□□ -0.09
TPR-204ENST00000469463 DMRT2Q9Y5R5 561 aa14.39□□□□□ -0.11
TPR-204ENST00000469463 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
TPR-204ENST00000469463 PPP4R3CPQ6ZMV5 832 aa14.15□□□□□ -0.14
TPR-204ENST00000469463 CNKSR2Q8WXI2 1034 aa13.93□□□□□ -0.18
TPR-204ENST00000469463 HOXD11P31277 338 aaPredicted RBP13.88□□□□□ -0.19
TPR-204ENST00000469463 RNF216Q9NWF9 866 aaPredicted RBP13.8□□□□□ -0.2
TPR-204ENST00000469463 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
TPR-204ENST00000469463 NCBP3Q53F19 620 aaKnown RBP13.7□□□□□ -0.22
TPR-204ENST00000469463 CACNB1Q02641 598 aaPredicted RBP13.54□□□□□ -0.24
TPR-204ENST00000469463 RNF39Q9H2S5 420 aa13.49□□□□□ -0.25
TPR-204ENST00000469463 DNAJC5BQ9UF47 199 aa13.48□□□□□ -0.25
TPR-204ENST00000469463 NPM3O75607 178 aaKnown RBP13.4□□□□□ -0.26
TPR-204ENST00000469463 C1QBPQ07021 282 aaKnown RBP13.34□□□□□ -0.27
TPR-204ENST00000469463 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.21□□□□□ -0.292e-8■■■□□ 15.8
TPR-204ENST00000469463 KCNA4P22459 653 aa13.13□□□□□ -0.31
TPR-204ENST00000469463 U3KPZ7 1027 aaPredicted RBP12.91□□□□□ -0.34
TPR-204ENST00000469463 SLC4A2P04920 1241 aa12.76□□□□□ -0.37
TPR-204ENST00000469463 CAPN15O75808 1086 aa12.71□□□□□ -0.37
TPR-204ENST00000469463 APLP2Q06481 763 aa12.71□□□□□ -0.37
TPR-204ENST00000469463 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.69□□□□□ -0.38
TPR-204ENST00000469463 HNRNPUL2Q1KMD3 747 aaKnown RBP12.69□□□□□ -0.38
TPR-204ENST00000469463 SPINK5Q9NQ38 1064 aaPredicted RBP12.67□□□□□ -0.38
TPR-204ENST00000469463 DSG3P32926 999 aa12.62□□□□□ -0.39
TPR-204ENST00000469463 SAMD1Q6SPF0 538 aaPredicted RBP12.57□□□□□ -0.4
TPR-204ENST00000469463 ZNF219Q9P2Y4 722 aaPredicted RBP12.56□□□□□ -0.4
TPR-204ENST00000469463 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
TPR-204ENST00000469463 MYCNP04198 464 aaPredicted RBP12.47□□□□□ -0.41
TPR-204ENST00000469463 SLC4A1APQ9BWU0 796 aaKnown RBP12.46□□□□□ -0.41
TPR-204ENST00000469463 ABCB7O75027 752 aa12.36□□□□□ -0.43
TPR-204ENST00000469463 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
TPR-204ENST00000469463 POLA2Q14181 598 aa12.17□□□□□ -0.46
TPR-204ENST00000469463 RBM42Q9BTD8 480 aaKnown RBP12.15□□□□□ -0.46
TPR-204ENST00000469463 POTEHQ6S545 545 aa12.06□□□□□ -0.48
TPR-204ENST00000469463 ZBTB22O15209 634 aa12.04□□□□□ -0.48
TPR-204ENST00000469463 ATF5Q9Y2D1 282 aaPredicted RBP12.04□□□□□ -0.48
TPR-204ENST00000469463 ZBTB12Q9Y330 459 aaPredicted RBP12.04□□□□□ -0.48
TPR-204ENST00000469463 ATXN8OSP0DMR3 200 aa12□□□□□ -0.49
TPR-204ENST00000469463 AKT1S1Q96B36 256 aa11.83□□□□□ -0.52
TPR-204ENST00000469463 CHRDL2Q6WN34 429 aa11.79□□□□□ -0.52
TPR-204ENST00000469463 OSCARQ8IYS5 282 aa11.77□□□□□ -0.53
TPR-204ENST00000469463 FBLN2P98095 1184 aa11.72□□□□□ -0.53
TPR-204ENST00000469463 REM2Q8IYK8 340 aaPredicted RBP11.66□□□□□ -0.54
TPR-204ENST00000469463 SPDYE2BA6NHP3 402 aa11.62□□□□□ -0.55
TPR-204ENST00000469463 SPDYE6P0CI01 402 aa11.62□□□□□ -0.55
TPR-204ENST00000469463 SPDYE2Q495Y8 402 aa11.62□□□□□ -0.55
TPR-204ENST00000469463 CSRNP3Q8WYN3 585 aa11.54□□□□□ -0.56
TPR-204ENST00000469463 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
TPR-204ENST00000469463 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.57
TPR-204ENST00000469463 PIP4P2Q8N4L2 257 aa11.49□□□□□ -0.57
TPR-204ENST00000469463 FXR2P51116 673 aaKnown RBP eCLIP11.45□□□□□ -0.583e-7■■□□□ 13.8
TPR-204ENST00000469463 ZNF692Q9BU19 519 aaPredicted RBP11.45□□□□□ -0.58
TPR-204ENST00000469463 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
TPR-204ENST00000469463 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
TPR-204ENST00000469463 EHMT2Q96KQ7 1210 aa11.4□□□□□ -0.58
TPR-204ENST00000469463 CLEC11AQ9Y240 323 aa11.34□□□□□ -0.59
TPR-204ENST00000469463 SP7Q8TDD2 431 aaPredicted RBP11.33□□□□□ -0.6
TPR-204ENST00000469463 HAX1O00165 279 aa11.29□□□□□ -0.6
TPR-204ENST00000469463 PABPN1Q86U42 306 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPR-204ENST00000469463 PRKAR2AP13861 404 aaKnown RBP11.25□□□□□ -0.61
TPR-204ENST00000469463 PRR29P0C7W0 189 aa11.19□□□□□ -0.62
TPR-204ENST00000469463 C19orf67A6NJJ6 358 aa11.08□□□□□ -0.64
TPR-204ENST00000469463 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
TPR-204ENST00000469463 SPDYE4A6NLX3 237 aa11.05□□□□□ -0.64
TPR-204ENST00000469463 EVX2Q03828 476 aa11.05□□□□□ -0.64
TPR-204ENST00000469463 STAG3Q9UJ98 1225 aa11.05□□□□□ -0.64
TPR-204ENST00000469463 FARP1Q9Y4F1 1045 aaPredicted RBP10.97□□□□□ -0.65
TPR-204ENST00000469463 CD44P16070 742 aaKnown RBP10.9□□□□□ -0.66
TPR-204ENST00000469463 GABBR2O75899 941 aa10.89□□□□□ -0.67
TPR-204ENST00000469463 CLCN6P51797 869 aa10.88□□□□□ -0.67
TPR-204ENST00000469463 CREBZFQ9NS37 354 aa10.87□□□□□ -0.67
TPR-204ENST00000469463 PROM2Q8N271 834 aa10.79□□□□□ -0.68
TPR-204ENST00000469463 NPM1P06748 294 aaKnown RBP eCLIP10.76□□□□□ -0.69
TPR-204ENST00000469463 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
TPR-204ENST00000469463 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
TPR-204ENST00000469463 ZRANB1Q9UGI0 708 aa10.74□□□□□ -0.69
TPR-204ENST00000469463 MNX1P50219 401 aaPredicted RBP10.68□□□□□ -0.7
TPR-204ENST00000469463 DCBLD2Q96PD2 775 aa10.65□□□□□ -0.7
TPR-204ENST00000469463 PLEKHG5O94827 1062 aa10.63□□□□□ -0.71
TPR-204ENST00000469463 POTEIP0CG38 1075 aa10.61□□□□□ -0.71
TPR-204ENST00000469463 LHX8Q68G74 356 aa10.61□□□□□ -0.71
TPR-204ENST00000469463 GALR2O43603 387 aaPredicted RBP10.56□□□□□ -0.72
TPR-204ENST00000469463 PHF12Q96QT6 1004 aa10.55□□□□□ -0.72
TPR-204ENST00000469463 MIER1Q8N108 512 aa10.54□□□□□ -0.72
TPR-204ENST00000469463 FKBP8Q14318 412 aa10.49□□□□□ -0.73
TPR-204ENST00000469463 ZBTB47Q9UFB7 747 aaPredicted RBP10.48□□□□□ -0.73
TPR-204ENST00000469463 PLCD3Q8N3E9 789 aa10.47□□□□□ -0.73
TPR-204ENST00000469463 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
TPR-204ENST00000469463 CCDC61Q9Y6R9 512 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms