RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 GOLGA6CA6NDK9 693 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 GOLGA6BA6NDN3 693 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 NPIPB15A6NHN6 443 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 A8MX80 341 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 ANKRD66B4E2M5 251 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 CCDC188H7C350 402 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 LATO43561 262 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 MMP20O60882 483 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 NDST3O95803 873 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 EPOP01588 193 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 KRT14P02533 472 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 ATXN1LP0C7T5 689 aaKnown RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 GOLGA6DP0CG33 693 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 CYP2A6P11509 494 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 ITPKAP23677 461 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 MAT2AP31153 395 aaKnown RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 VIPR1P32241 457 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 ADRA1AP35348 466 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 HNF1BP35680 557 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 CHRNA4P43681 627 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 TNNT3P45378 269 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 LIG3P49916 1009 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 RPS21P63220 83 aaKnown RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 NHLH1Q02575 133 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 RALGDSQ12967 914 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 TRIP13Q15645 432 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 TMEM259Q4ZIN3 620 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 WDR45BQ5MNZ6 344 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 SYCP2LQ5T4T6 812 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 KCTD11Q693B1 232 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 LAIR1Q6GTX8 287 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 CCDC70Q6NSX1 233 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 C4orf22Q6V702 233 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 KLHL7Q8IXQ5 586 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 RGL4Q8IZJ4 473 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 PDCD7Q8N8D1 485 aaKnown RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 KIF18AQ8NI77 898 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 SNX19Q92543 992 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 LYSMD1Q96S90 227 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 WRAP53Q9BUR4 548 aaKnown RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 FICDQ9BVA6 458 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 FSD1LQ9BXM9 530 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 EBF2Q9HAK2 575 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 ETNK1Q9HBU6 452 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 RAB6BQ9NRW1 208 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 GOLGA6AQ9NYA3 693 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 PCYOX1Q9UHG3 505 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 FEZ2Q9UHY8 353 aaPredicted RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 TPX2Q9ULW0 747 aaKnown RBP11.84□□□□□ -0.51
CPNE1-221ENST00000462352 THADAQ6YHU6 1953 aa11.84□□□□□ -0.51
CPNE1-221ENST00000462352 SPAG17Q6Q759 2223 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 A0A1W2PPC4 97 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 IGLON5A6NGN9 336 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 CAPN8A6NHC0 703 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 PSMD3O43242 534 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 HEXIM1O94992 359 aaKnown RBP11.83□□□□□ -0.52
CPNE1-221ENST00000462352 EPN2O95208 641 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 ECEL1O95672 775 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 AP2A1O95782 977 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 GAS8O95995 478 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 AGTP01019 485 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 LMNAP02545 664 aaKnown RBP11.83□□□□□ -0.52
CPNE1-221ENST00000462352 ELFN1P0C7U0 828 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 C6P13671 934 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 HLA-DPA1P20036 260 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 LHCGRP22888 699 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 CD27P26842 260 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 MAOBP27338 520 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 OLIG2Q13516 323 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SEMA5AQ13591 1074 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SPARCL1Q14515 664 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SLC1A5Q15758 541 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 CNGA3Q16281 694 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 ZNF284Q2VY69 593 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SIRPB2Q5JXA9 342 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 CRTC1Q6UUV9 634 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 RANBP10Q6VN20 620 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 LIPIQ6XZB0 460 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 CYP2U1Q7Z449 544 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 TSPAN33Q86UF1 283 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SLC25A41Q8N5S1 370 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SPATA4Q8NEY3 305 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 DNASE2BQ8WZ79 361 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 KLK6Q92876 244 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SLCO2A1Q92959 643 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 LOXL4Q96JB6 756 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 PHOX2BQ99453 314 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 TBL1YQ9BQ87 522 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 APOL2Q9BQE5 337 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 ORAI3Q9BRQ5 295 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 C1QTNF2Q9BXJ5 285 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SLC17A9Q9BYT1 436 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 LRRC40Q9H9A6 602 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 EIF2B4Q9UI10 523 aaKnown RBP11.83□□□□□ -0.52
CPNE1-221ENST00000462352 NEU2Q9Y3R4 380 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 GPR179Q6PRD1 2367 aa11.83□□□□□ -0.52
CPNE1-221ENST00000462352 ATXN2Q99700 1313 aaKnown RBP11.83□□□□□ -0.52
CPNE1-221ENST00000462352 SDK1Q7Z5N4 2213 aa11.82□□□□□ -0.52
CPNE1-221ENST00000462352 A0A0U1RQS6 177 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms