RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 C8orf59Q8N0T1 100 aaPredicted RBP14.82□□□□□ -0.04
PTPRU-205ENST00000460170 TADA1Q96BN2 335 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 C1orf50Q9BV19 199 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 TMEM39AQ9NV64 488 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 DOLKQ9UPQ8 538 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 TCAF1Q9Y4C2 921 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 NFS1Q9Y697 457 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 SH3BGRLO75368 114 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 UQCRBP14927 111 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 RXRGP48443 463 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 TCEAL1Q15170 157 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 SOWAHAQ2M3V2 549 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 PARP15Q460N3 678 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 RHBDF2Q6PJF5 856 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 OOSP2Q86WS3 158 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 ATAD1Q8NBU5 361 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 HJURPQ8NCD3 748 aaPredicted RBP14.82□□□□□ -0.04
PTPRU-205ENST00000460170 TCF12Q99081 682 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 ZFP14Q9HCL3 533 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 MRPL17Q9NRX2 175 aaKnown RBP14.82□□□□□ -0.04
PTPRU-205ENST00000460170 CLIC5Q9NZA1 410 aa14.82□□□□□ -0.04
PTPRU-205ENST00000460170 NUP188Q5SRE5 1749 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 ABLIM1O14639 778 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 DLGAP3O95886 979 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 AMHP03971 560 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 MC4RP32245 332 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 SLC18A1P54219 525 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 RPL38P63173 70 aaKnown RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 MPP1Q00013 466 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 RGMBQ6NW40 437 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 GK5Q6ZS86 529 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 DSELQ8IZU8 1212 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 C10orf82Q8WW14 230 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 DDX1Q92499 740 aaKnown RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 ZFYVE19Q96K21 471 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 OSBPL11Q9BXB4 747 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 ACSS2Q9NR19 701 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 FBXW11Q9UKB1 542 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 TCRBV7S3A2A0A539 114 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 YJEFN3A6XGL0 299 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 MATN3O15232 486 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 YBEYP58557 167 aaPredicted RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 SH3D19Q5HYK7 790 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 LPCAT4Q643R3 524 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 CFAP52Q8N1V2 620 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 ZNF558Q96NG5 402 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 SLC7A5P2Q9GIP4 190 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 SLC25A51Q9H1U9 297 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 GMIPQ9P107 970 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 LIN7AO14910 233 aaPredicted RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 LGR5O75473 907 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 RPP40O75818 363 aaKnown RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 GSTM1P09488 218 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 HPCAL1P37235 193 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 OGDHQ02218 1023 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 KHDC1Q4VXA5 237 aaKnown RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 LENG8Q96PV6 779 aaPredicted RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 MINDY3Q9H8M7 445 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 DUSP12Q9UNI6 340 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 SPACA6W5XKT8 324 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 FAM220BPB1ANY3 271 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 NRLP54845 237 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 MRPL28Q13084 256 aaKnown RBP14.81□□□□□ -0.04
PTPRU-205ENST00000460170 TMEM110Q86TL2 294 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 CCDC103Q8IW40 242 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 GLIS1Q8NBF1 620 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 CD101Q93033 1021 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 TMEM245Q9H330 911 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 USE1Q9NZ43 259 aa14.81□□□□□ -0.04
PTPRU-205ENST00000460170 BBIP1A8MTZ0 92 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 NMBRP28336 390 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 SLC16A1P53985 500 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 DUSP4Q13115 394 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 PPM1LQ5SGD2 360 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 TEKT5Q96M29 485 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 MRPS26Q9BYN8 205 aaKnown RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 REEP1Q9H902 201 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 TAS2R1Q9NYW7 299 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 EGFL7Q9UHF1 273 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 CLDN11O75508 207 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 PCDH8O95206 1070 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 MT-CYBP00156 380 aaPredicted RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 POLR2EP19388 210 aaKnown RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 ESRP1Q6NXG1 681 aaKnown RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 HOPXQ9BPY8 73 aaPredicted RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 YIPF2Q9BWQ6 316 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 ENOPH1Q9UHY7 261 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 STYXL1Q9Y6J8 313 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 A0A0J9YYE9 177 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 MOXD2PA6NHM9 499 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 NFKBIEO00221 500 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 CTPS1P17812 591 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 GSSP48637 474 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 GLUD2P49448 558 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 FLT3LGP49771 235 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 SMARCB1Q12824 385 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 KRR1Q13601 381 aaKnown RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 SETMARQ53H47 684 aaPredicted RBP14.8□□□□□ -0.04
PTPRU-205ENST00000460170 LYPLAL1Q5VWZ2 237 aa14.8□□□□□ -0.04
PTPRU-205ENST00000460170 GCNT7Q6ZNI0 430 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms