RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CHRAC1Q9NRG0 131 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.7□□□□□ -0.06
TNF-208ENST00000449264 PHTF1Q9UMS5 762 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 TCAF1Q9Y4C2 921 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 ARL5AQ9Y689 179 aa14.7□□□□□ -0.06
TNF-208ENST00000449264 TTC28Q96AY4 2481 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 A0A1W2PQ67 120 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 HEATR9A2RTY3 570 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 CAPN8A6NHC0 703 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 UPK3BL1B0FP48 263 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 UPK3BL2E5RIL1 263 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 DYNC1I1O14576 645 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 MID1O15344 667 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 PGAM1P18669 254 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 COPAP53621 1224 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 POLR2LP62875 67 aaKnown RBP14.69□□□□□ -0.06
TNF-208ENST00000449264 SMAD1Q15797 465 aaKnown RBP14.69□□□□□ -0.06
TNF-208ENST00000449264 CST6Q15828 149 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 UGP2Q16851 508 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 PCID2Q5JVF3 399 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 FAM46CQ5VWP2 391 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 ZNF776Q68DI1 518 aaPredicted RBP14.69□□□□□ -0.06
TNF-208ENST00000449264 TMEM92Q6UXU6 159 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 NDUFAF2Q8N183 169 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 ZNF669Q96BR6 464 aaPredicted RBP14.69□□□□□ -0.06
TNF-208ENST00000449264 UHRF1Q96T88 793 aaPredicted RBP14.69□□□□□ -0.06
TNF-208ENST00000449264 MKRN2Q9H000 416 aaKnown RBP14.69□□□□□ -0.06
TNF-208ENST00000449264 DKK3Q9UBP4 350 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 SOX13Q9UN79 622 aa14.69□□□□□ -0.06
TNF-208ENST00000449264 TCRBV21S2A2A0A5A6 115 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TSPAN11A1L157 253 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 NPIPB15A6NHN6 443 aaPredicted RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 AURKAO14965 403 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 BUD23O43709 281 aaKnown RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 ADH1BP00325 375 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 ADRA1DP25100 572 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 SSTR1P30872 391 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 HOXD11P31277 338 aaPredicted RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 HNF1BP35680 557 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 HSD17B3P37058 310 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 FAM193AP78312 1265 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 MSLNQ13421 630 aaPredicted RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 FBXL19Q6PCT2 694 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 UNC5AQ6ZN44 842 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TRIM67Q6ZTA4 783 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TRMT10CQ7L0Y3 403 aaKnown RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 TTC7BQ86TV6 843 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 RELL1Q8IUW5 271 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 SYNPOQ8N3V7 929 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 MDGA1Q8NFP4 955 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 PJA1Q8NG27 643 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 UHMK1Q8TAS1 419 aaKnown RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 ANKRD7Q92527 254 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 ZNF778Q96MU6 729 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TTC25Q96NG3 672 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 NELL2Q99435 816 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 MFSD1Q9H3U5 465 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 FBRSQ9HAH7 460 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 LRRC4CQ9HCJ2 640 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 PCDH12Q9NPG4 1184 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 ZNF711Q9Y462 761 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 RPS6KL1Q9Y6S9 549 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 SCN8AQ9UQD0 1980 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 A0A0C4DFX4 3053 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 C1orf232A0A0U1RR37 186 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 RIPK2O43353 540 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TTC4O95801 387 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TIMP2P16035 220 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 NMBRP28336 390 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 RPS14P62263 151 aaKnown RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 FZD5Q13467 585 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 CRYMQ14894 314 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 UAP1Q16222 522 aaPredicted RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 CRY1Q16526 586 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 LYSMD3Q7Z3D4 306 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TSPAN33Q86UF1 283 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 TMPRSS6Q8IU80 811 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 BRSK1Q8TDC3 778 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 MFSD3Q96ES6 412 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 RANBP9Q96S59 729 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 NAT9Q9BTE0 207 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 GPR63Q9BZJ6 419 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 PABPC3Q9H361 631 aaKnown RBP14.68□□□□□ -0.06
TNF-208ENST00000449264 HACD3Q9P035 362 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 B4GALT6Q9UBX8 382 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 ITM2BQ9Y287 266 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 KCTD3Q9Y597 815 aa14.68□□□□□ -0.06
TNF-208ENST00000449264 BPTFQ12830 3046 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 FAM237BA0A1B0GVD1 139 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 A0A1W2PP55 124 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 LDB2O43679 373 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 CRTAMO95727 393 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 DNTTP04053 509 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 POLBP06746 335 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 ADRB3P13945 408 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 NFKBIAP25963 317 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 NEK3P51956 506 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 GPX6P59796 221 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 TMPRSS15P98073 1019 aa14.67□□□□□ -0.06
TNF-208ENST00000449264 CNTN1Q12860 1018 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms