RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 RTP4Q96DX8 246 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ZBTB45Q96K62 511 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 BCL7BQ9BQE9 202 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CD300AQ9UGN4 299 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 EGFL7Q9UHF1 273 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ADGRA2Q96PE1 1338 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PNMA8CA0A1B0GUJ8 204 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 A8MV72 311 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 TMEM233B4DJY2 109 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 EPN2O95208 641 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NDST3O95803 873 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 BMP4P12644 408 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 IL1R1P14778 569 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SLC26A3P40879 764 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CASP3P42574 277 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NFIAQ12857 509 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 FAM182AQ5T1J6 154 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SLC41A1Q8IVJ1 513 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NAT16Q8N8M0 369 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 OR52K1Q8NGK4 314 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 OR13J1Q8NGT2 312 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PHF10Q8WUB8 498 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 CLIP3Q96DZ5 547 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 HPDLQ96IR7 371 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 STOML2Q9UJZ1 356 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 C1orf167Q5SNV9 1468 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PLIN4Q96Q06 1357 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 C2CD4BA6NLJ0 364 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 C12orf71A8MTZ7 269 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 GRIA1P42261 906 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 TGFB2P61812 414 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 TRIM60Q495X7 471 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 COLGALT1Q8NBJ5 622 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SETD9Q8NE22 299 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SLCO4A1Q96BD0 722 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NXNL1Q96CM4 212 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ACTR3BQ9P1U1 418 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PRORSD1PA6NEY8 169 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 UPK1BO75841 260 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 LTFP02788 710 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 INHBBP09529 407 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 KCNK10P57789 538 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 LRP8Q14114 963 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SLC26A9Q7LBE3 791 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ZBTB8OSQ8IWT0 167 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ARFGAP1Q8N6T3 406 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SEPT1Q8WYJ6 367 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MEAF6Q9HAF1 191 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NPAP1Q9NZP6 1156 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 IL7RP16871 459 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MTHFRP42898 656 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PTPN11Q06124 597 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 GRM1Q13255 1194 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NFYCQ13952 458 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PPP1R3AQ16821 1122 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SH3PXD2AQ5TCZ1 1133 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 KCNMB4Q86W47 210 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CCDC28AQ8IWP9 274 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ELMOD2Q8IZ81 293 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 TTC16Q8NEE8 873 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 DACT3Q96B18 629 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 OMDQ99983 421 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RIBC2Q9H4K1 309 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 POMKQ9H5K3 350 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 TMEM181Q9P2C4 612 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 FBXO40Q9UH90 709 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 NRP1O14786 923 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 RSL1D1O76021 490 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 JCHAINP01591 159 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MTHFD1P11586 935 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 PSMB4P28070 264 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 PTGER2P43116 358 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 SERPINH1P50454 418 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 RDM1Q8NG50 284 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 VPS35Q96QK1 796 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CDK5RAP1Q96SZ6 601 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 ATP13A3Q9H7F0 1226 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 TESMINQ9Y4I5 508 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 GRID2O43424 1007 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 HTR2BP41595 481 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MAGEA3P43357 314 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 CTBSQ01459 385 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 YWHAHQ04917 246 aaPredicted RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 EPS8Q12929 822 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 JOSD2Q8TAC2 188 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 HEXDCQ8WVB3 486 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 MUL1Q969V5 352 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 BIRC7Q96CA5 298 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ACO2Q99798 780 aaKnown RBP5.04□□□□□ -1.6
HERC1-201ENST00000443617 POLLQ9UGP5 575 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 DSEQ9UL01 958 aa5.04□□□□□ -1.6
HERC1-201ENST00000443617 ZW10O43264 779 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CD1EP15812 388 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 SOX6P35712 828 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 POLR2IP36954 125 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 DNAJB13P59910 316 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 IL5RAQ01344 420 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CATSPER4Q7RTX7 472 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PCDH19Q8TAB3 1148 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 SPPL2BQ8TCT7 592 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms