RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 FAM76AQ8TAV0 307 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 LTV1Q96GA3 475 aaPredicted RBP3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 RMDN3Q96TC7 470 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 CYSLTR2Q9NS75 346 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 POU2F3Q9UKI9 436 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 CDC14AQ9UNH5 594 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 CNPY2Q9Y2B0 182 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 PSAT1Q9Y617 370 aa3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 AQRO60306 1485 aaKnown RBP eCLIP3.2□□□□□ -1.9
HMGB1P31-201ENST00000437242 ATXN2Q99700 1313 aaKnown RBP3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 EXTL3O43909 919 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 RFPL2O75678 378 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 RGS11O94810 467 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 SRCP12931 536 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 KRT2P35908 639 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 NOVP48745 357 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 GALNT1Q10472 559 aaPredicted RBP3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 TRIM14Q14142 442 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 PFKFB4Q16877 469 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 CCDC38Q502W7 563 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 ANO1Q5XXA6 986 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 NAPEPLDQ6IQ20 393 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 LIN54Q6MZP7 749 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 GJB7Q6PEY0 223 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 RASGRP2Q7LDG7 609 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 DSG4Q86SJ6 1040 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 NFE4Q86UQ8 179 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 LURAP1LQ8IV03 231 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 SPATA22Q8NHS9 363 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 F2RL3Q96RI0 385 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 ISCA1Q9BUE6 129 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 HERC2P3Q9BVR0 1158 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 NDRG3Q9UGV2 375 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 CFTRP13569 1480 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 TOPBP1Q92547 1522 aa3.19□□□□□ -1.9
HMGB1P31-201ENST00000437242 TYW5A2RUC4 315 aaKnown RBP3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 LILRA5A6NI73 299 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 H0Y3Z8 333 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 EBAG9O00559 213 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 ACKR2O00590 384 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 SOCS6O14544 535 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 NDUFS7O75251 213 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 CDH1P12830 882 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 SERPINF1P36955 418 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 RBM5P52756 815 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 PITX1P78337 314 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 RELQ04864 619 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 TUBB8Q3ZCM7 444 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 PPP6R3Q5H9R7 873 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 PAPPA-AS1Q5QFB9 102 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 TANGO2Q6ICL3 276 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 SULT6B1Q6IMI4 303 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 CES5AQ6NT32 575 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 CHD1LQ86WJ1 897 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZNF248Q8NDW4 579 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 TMEM170AQ8WVE7 144 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 TRAPPC12Q8WVT3 735 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 CCT6BQ92526 530 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 GOLGA1Q92805 767 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 NPLQ9BXD5 320 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 CTDSP1Q9GZU7 261 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 DACT1Q9NYF0 836 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 HDAC6Q9UBN7 1215 aa3.18□□□□□ -1.9
HMGB1P31-201ENST00000437242 IFT140Q96RY7 1462 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 RAD54L2Q9Y4B4 1467 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 ASPDHA6ND91 283 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 E7EVH7 732 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 ZNF500O60304 480 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 NBNO60934 754 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 NDUFB4O95168 129 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 CD53P19397 219 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 CD72P21854 359 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 STX2P32856 288 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 CHKAP35790 457 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 HALP42357 657 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 MCM2P49736 904 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 SLC20A2Q08357 652 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 ARHGEF6Q15052 776 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 EFNB3Q15768 340 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 TMEM95Q3KNT9 176 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 WDR73Q6P4I2 378 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 CCDC174Q6PII3 467 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 ODF3L1Q8IXM7 274 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 ANKRD42Q8N9B4 389 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 ATG16L2Q8NAA4 619 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 SLC24A4Q8NFF2 622 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 ERGIC1Q969X5 290 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 KTI12Q96EK9 354 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 PPCSQ9HAB8 311 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 KLHL1Q9NR64 748 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 C1RLQ9NZP8 487 aa3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 GREB1LQ9C091 1923 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P31-201ENST00000437242 SNAPC4Q5SXM2 1469 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 WDR97A6NE52 1622 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 TSPOAP1O95153 1857 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 HMX3A6NHT5 357 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 PMS2P5A8MQ11 134 aa3.16□□□□□ -1.9
HMGB1P31-201ENST00000437242 PLRG1O43660 514 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms