RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 PHTF1Q9UMS5 762 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.78■□□□□ 0.28
VRK2-204ENST00000428021 RAI2Q9Y5P3 530 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 SPEGQ15772 3267 aa16.78■□□□□ 0.28
VRK2-204ENST00000428021 TDRD6O60522 2096 aaKnown RBP16.77■□□□□ 0.28
VRK2-204ENST00000428021 A8MX80 341 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 GOLGA6L6A8MZA4 724 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 YKT6O15498 198 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 CPP00450 1065 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 MMP2P08253 660 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 PDHA1P08559 390 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 CES1P23141 567 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 CTNNA2P26232 953 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 PMLP29590 882 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 RABIFP47224 123 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 NR2C2P49116 596 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 ARRB1P49407 418 aaPredicted RBP16.77■□□□□ 0.28
VRK2-204ENST00000428021 PEX5P50542 639 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 SIM1P81133 766 aaPredicted RBP16.77■□□□□ 0.28
VRK2-204ENST00000428021 AP1B1Q10567 949 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 KIF5AQ12840 1032 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 FZD2Q14332 565 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 PRKD1Q15139 912 aaPredicted RBP16.77■□□□□ 0.28
VRK2-204ENST00000428021 PTPRRQ15256 657 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 IRF4Q15306 451 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 PPP2R5EQ16537 467 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 ARMC12Q5T9G4 340 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 GLRX5Q86SX6 157 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 NT5DC3Q86UY8 548 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 DCP2Q8IU60 420 aaKnown RBP16.77■□□□□ 0.28
VRK2-204ENST00000428021 CBARPQ8N350 705 aaPredicted RBP16.77■□□□□ 0.28
VRK2-204ENST00000428021 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.77■□□□□ 0.28
VRK2-204ENST00000428021 RBM41Q96IZ5 413 aaKnown RBP16.77■□□□□ 0.28
VRK2-204ENST00000428021 HERPUD2Q9BSE4 406 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 BRD8Q9H0E9 1235 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 PPIL1Q9Y3C6 166 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 ADGRG1Q9Y653 693 aa16.77■□□□□ 0.28
VRK2-204ENST00000428021 SPTY2D1-AS1A0A0U1RR47 76 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 MACROD2A1Z1Q3 448 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 PPP1R12AO14974 1030 aaPredicted RBP16.76■□□□□ 0.27
VRK2-204ENST00000428021 PRLP01236 227 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 ITGAVP06756 1048 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 TGM2P21980 687 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 GRK6P43250 576 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 LRRC14Q15048 493 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 PAF1Q8N7H5 531 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 ALG3Q92685 438 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 IFT43Q96FT9 208 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 SCRN2Q96FV2 425 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 SMIM14Q96QK8 99 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 MCCC1Q96RQ3 725 aaPredicted RBP16.76■□□□□ 0.27
VRK2-204ENST00000428021 C1QTNF7Q9BXJ2 289 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 HEMGNQ9BXL5 484 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 CEP41Q9BYV8 373 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 TTLL3Q9Y4R7 772 aa16.76■□□□□ 0.27
VRK2-204ENST00000428021 LZTS3O60299 673 aaPredicted RBP16.75■□□□□ 0.27
VRK2-204ENST00000428021 SDC3O75056 442 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 RECQL5O94762 991 aaPredicted RBP16.75■□□□□ 0.27
VRK2-204ENST00000428021 ELFN1P0C7U0 828 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 VIPR1P32241 457 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 COPS2P61201 443 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 CNGA3Q16281 694 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 ZNF542PQ5EBM4 170 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 BBS12Q6ZW61 710 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 CCDC50Q8IVM0 306 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 SLC25A45Q8N413 288 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 COQ10AQ96MF6 247 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 TDRD1Q9BXT4 1180 aaKnown RBP16.75■□□□□ 0.27
VRK2-204ENST00000428021 KLF15Q9UIH9 416 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 WASF3Q9UPY6 502 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 CHKBQ9Y259 395 aa16.75■□□□□ 0.27
VRK2-204ENST00000428021 COL5A1P20908 1838 aaPredicted RBP16.75■□□□□ 0.27
VRK2-204ENST00000428021 CCDC66A2RUB6 948 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 NPIPB15A6NHN6 443 aaPredicted RBP16.74■□□□□ 0.27
VRK2-204ENST00000428021 NEBLO76041 1014 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 HEXIM1O94992 359 aaKnown RBP16.74■□□□□ 0.27
VRK2-204ENST00000428021 CTPS1P17812 591 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 LHCGRP22888 699 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 PTPN7P35236 360 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 CD86P42081 329 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 YPEL5P62699 121 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 SKOR1P84550 965 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 EIF2B5Q13144 721 aaKnown RBP16.74■□□□□ 0.27
VRK2-204ENST00000428021 PDE1CQ14123 709 aaPredicted RBP16.74■□□□□ 0.27
VRK2-204ENST00000428021 AADACL2Q6P093 401 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 BZW1Q7L1Q6 419 aaKnown RBP16.74■□□□□ 0.27
VRK2-204ENST00000428021 TSPAN33Q86UF1 283 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 SLCO6A1Q86UG4 719 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 TXLNBQ8N3L3 684 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 PLA2G15Q8NCC3 412 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 TFB1MQ8WVM0 346 aaKnown RBP16.74■□□□□ 0.27
VRK2-204ENST00000428021 P3H4Q92791 437 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 HAUS1Q96CS2 278 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 CDC6Q99741 560 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 HAUS2Q9NVX0 235 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 UCKL1Q9NWZ5 548 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 TOR4AQ9NXH8 423 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 SEPT10Q9P0V9 454 aa16.74■□□□□ 0.27
VRK2-204ENST00000428021 PNMA8BQ9ULN7 279 aaPredicted RBP16.74■□□□□ 0.27
VRK2-204ENST00000428021 EFR3BQ9Y2G0 817 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms