RNA–Protein interactions for RNA: ENST00000423723.1

NCDN-204, Transcript of neurochondrin, humanhuman

TSL 3

Gene NCDN, Length 986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-204ENST00000423723 DKK3Q9UBP4 350 aa11.74□□□□□ -0.53
NCDN-204ENST00000423723 FNDC3AQ9Y2H6 1198 aaKnown RBP11.74□□□□□ -0.53
NCDN-204ENST00000423723 FCF1Q9Y324 198 aaKnown RBP11.74□□□□□ -0.53
NCDN-204ENST00000423723 FADS3Q9Y5Q0 445 aa11.74□□□□□ -0.53
NCDN-204ENST00000423723 SNX11Q9Y5W9 270 aa11.74□□□□□ -0.53
NCDN-204ENST00000423723 EPG5Q9HCE0 2579 aa11.74□□□□□ -0.53
NCDN-204ENST00000423723 NYNRINQ9P2P1 1898 aaKnown RBP11.74□□□□□ -0.53
NCDN-204ENST00000423723 DOCK9Q9BZ29 2069 aa11.74□□□□□ -0.53
NCDN-204ENST00000423723 A0A1B0GTQ1 180 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 PRAMEF26H0Y7S4 382 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 KPNA3O00505 521 aaPredicted RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 AREL1O15033 823 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 CREB3O43889 395 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 SH3BP5O60239 455 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 PRAMEF11O60813 436 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 TMCC1O94876 653 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 IL4RP24394 825 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 ARSEP51690 589 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 TPI1P60174 286 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 SNRPD1P62314 119 aaKnown RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 SLC25A11Q02978 314 aaKnown RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 IFFO1Q0D2I5 559 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 CALCOCO2Q13137 446 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 PPP1R7Q15435 360 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 CYTH1Q15438 398 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 SHBQ15464 509 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 UAP1L1Q3KQV9 507 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 KRT71Q3SY84 523 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 ZNF805Q5CZA5 627 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 DENND2CQ68D51 928 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 RFX8Q6ZV50 586 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 PRPF39Q86UA1 669 aaKnown RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 HORMAD1Q86X24 394 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 BBOF1Q8ND07 529 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 DEFB124Q8NES8 71 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 FAM174AQ8TBP5 190 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 SPOCK2Q92563 424 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 PPP1R16AQ96I34 528 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 RBM41Q96IZ5 413 aaKnown RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 SLC6A18Q96N87 628 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 OSBPL1AQ9BXW6 950 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 SLC39A8Q9C0K1 460 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 TSPYL1Q9H0U9 437 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 EPB41L4BQ9H329 900 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 DHX35Q9H5Z1 703 aaKnown RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 GPR27Q9NS67 375 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 GPATCH2LQ9NWQ4 482 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 RCOR3Q9P2K3 495 aaPredicted RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 PCSK1NQ9UHG2 260 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 PCOLCE2Q9UKZ9 415 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 ZFR2Q9UPR6 939 aaKnown RBP11.73□□□□□ -0.53
NCDN-204ENST00000423723 ATP8A1Q9Y2Q0 1164 aa11.73□□□□□ -0.53
NCDN-204ENST00000423723 TRPM6Q9BX84 2022 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 ASPMQ8IZT6 3477 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 TSPAN11A1L157 253 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 FAM47DPA6NHR8 397 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 H0Y8X5 98 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 TLR4O00206 839 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 EEF2KO00418 725 aaKnown RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 SPINT1O43278 529 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 ADRB3P13945 408 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 TCF4P15884 667 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 ITIH2P19823 946 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 PTPN7P35236 360 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 MDH1P40925 334 aaKnown RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 SUOXP51687 545 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 NEK3P51956 506 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 NXPH1P58417 271 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 TAS2R40P59535 323 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 COPS2P61201 443 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 PPP2R2AP63151 447 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 NSUN2Q08J23 767 aaKnown RBP eCLIP11.72□□□□□ -0.53
NCDN-204ENST00000423723 KLF1Q13351 362 aaPredicted RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 RFTN1Q14699 578 aaPredicted RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 CCNG2Q16589 344 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 CEP128Q6ZU80 1094 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 TRMT10CQ7L0Y3 403 aaKnown RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 KANSL1Q7Z3B3 1105 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 ABI3BPQ7Z7G0 1075 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 RCOR2Q8IZ40 523 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 OR2W6PQ8NHA6 318 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 ATL2Q8NHH9 583 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 SNX19Q92543 992 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 SKA1Q96BD8 255 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 TLCD1Q96CP7 247 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 SERAC1Q96JX3 654 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 LENG8Q96PV6 779 aaPredicted RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 ELF4Q99607 663 aaPredicted RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 C1QTNF2Q9BXJ5 285 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 OSBPL8Q9BZF1 889 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
NCDN-204ENST00000423723 LHX3Q9UBR4 397 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 HS3ST3A1Q9Y663 406 aa11.72□□□□□ -0.53
NCDN-204ENST00000423723 A0A1W2PQU0 124 aa11.71□□□□□ -0.53
NCDN-204ENST00000423723 ARHGAP42A6NI28 874 aa11.71□□□□□ -0.53
NCDN-204ENST00000423723 C16orf96A6NNT2 1141 aa11.71□□□□□ -0.53
NCDN-204ENST00000423723 J3KR12 359 aa11.71□□□□□ -0.53
NCDN-204ENST00000423723 FLRT2O43155 660 aa11.71□□□□□ -0.53
NCDN-204ENST00000423723 TSPAN6O43657 245 aa11.71□□□□□ -0.53
NCDN-204ENST00000423723 BNIP3LO60238 219 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms