RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 CAPN8A6NHC0 703 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 UPK3BL1B0FP48 263 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 UPK3BL2E5RIL1 263 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 LDB2O43679 373 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 SPAG6O75602 509 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 CRTAMO95727 393 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 IL1BP01584 269 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 PGAM1P18669 254 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 C5AR1P21730 350 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 NFKBIAP25963 317 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 HNF1BP35680 557 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 RPS14P62263 151 aaKnown RBP14.31□□□□□ -0.12
SF3B1-204ENST00000414963 CRADDP78560 199 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 SATB1Q01826 763 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 ZBTB16Q05516 673 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 POU6F1Q14863 301 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 UBXN2BQ14CS0 331 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 TAF1AQ15573 450 aaPredicted RBP14.31□□□□□ -0.12
SF3B1-204ENST00000414963 CST6Q15828 149 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 KYNUQ16719 465 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 HP1BP3Q5SSJ5 553 aaPredicted RBP14.31□□□□□ -0.12
SF3B1-204ENST00000414963 ZNF776Q68DI1 518 aaPredicted RBP14.31□□□□□ -0.12
SF3B1-204ENST00000414963 USP45Q70EL2 814 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 SYT13Q7L8C5 426 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 ANKMY2Q8IV38 441 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 MMAAQ8IVH4 418 aaKnown RBP14.31□□□□□ -0.12
SF3B1-204ENST00000414963 PALM2Q8IXS6 379 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 PPHLN1Q8NEY8 458 aaKnown RBP14.31□□□□□ -0.12
SF3B1-204ENST00000414963 FAM131CQ96AQ9 280 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 ARRDC3Q96B67 414 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 C9orf72Q96LT7 481 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 EPB41L4BQ9H329 900 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 LRRC4CQ9HCJ2 640 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 SCML1Q9UN30 329 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 SPO11Q9Y5K1 396 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 MAD1L1Q9Y6D9 718 aa14.31□□□□□ -0.12
SF3B1-204ENST00000414963 KPNA3O00505 521 aaPredicted RBP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 RIPK2O43353 540 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 USP1O94782 785 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 ALDH1A2O94788 518 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 POLBP06746 335 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 ABHD2P08910 425 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 COL9A1P20849 921 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 HSD17B3P37058 310 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 ABL2P42684 1182 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 RPS9P46781 194 aaKnown RBP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 GPX6P59796 221 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 PDE1BQ01064 536 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 ACVR1Q04771 509 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 UAP1Q16222 522 aaPredicted RBP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 CRY1Q16526 586 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 ANKRD20A4Q4UJ75 823 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 SPANXN3Q5MJ09 141 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 DENND2CQ68D51 928 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 CASC4Q6P4E1 433 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 TMEM92Q6UXU6 159 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 UNC5AQ6ZN44 842 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 Q6ZS52 159 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 ERN2Q76MJ5 926 aaKnown RBP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 PARS2Q7L3T8 475 aaKnown RBP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 TTC30BQ8N4P2 665 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 MDGA1Q8NFP4 955 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 PJA1Q8NG27 643 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 BLOC1S5Q8TDH9 187 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 EDAQ92838 391 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 RAB7BQ96AH8 199 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 NECAB3Q96P71 396 aaPredicted RBP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 FOXQ1Q9C009 403 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 MKRN2Q9H000 416 aaKnown RBP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 CHRAC1Q9NRG0 131 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 TREX1Q9NSU2 369 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.3□□□□□ -0.12
SF3B1-204ENST00000414963 CHMP2BQ9UQN3 213 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 FAM169AQ9Y6X4 670 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 CKAP5Q14008 2032 aa14.3□□□□□ -0.12
SF3B1-204ENST00000414963 ZCWPW2A0A1B0GU75 182 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 C2orf81A6NN90 581 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 AREL1O15033 823 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 ALPIP09923 528 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 PIRTP0C851 137 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 CTPS1P17812 591 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 PSMD8P48556 350 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 DGKEP52429 567 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 SIGLEC14Q08ET2 396 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 CCDC15Q0P6D6 951 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 GAS6Q14393 721 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 TSTD2Q5T7W7 516 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 ZNF449Q6P9G9 518 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 CRTC1Q6UUV9 634 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 MAMSTRQ6ZN01 415 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 C3orf62Q6ZUJ4 267 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 DPPA4Q7L190 304 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 TTC7BQ86TV6 843 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 TMPRSS6Q8IU80 811 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 CBARPQ8N350 705 aaPredicted RBP14.29□□□□□ -0.12
SF3B1-204ENST00000414963 PAF1Q8N7H5 531 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 STYXQ8WUJ0 223 aa14.29□□□□□ -0.12
SF3B1-204ENST00000414963 FCRL3Q96P31 734 aaPredicted RBP14.29□□□□□ -0.12
SF3B1-204ENST00000414963 SMIM14Q96QK8 99 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms