RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 GOLGA6AQ9NYA3 693 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 DOCK9Q9BZ29 2069 aa17.76■□□□□ 0.43
CTNS-203ENST00000399306 PTPRZ1P23471 2315 aaPredicted RBP17.76■□□□□ 0.43
CTNS-203ENST00000399306 USP34Q70CQ2 3546 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 GVINP1Q7Z2Y8 2422 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 GOLGA6L10A0A0M3HER8 536 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 LOC285095A0A1B0GVY8 99 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 ANKRD66B4E2M5 251 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 TOR1BO14657 336 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 BCAT2O15382 392 aaPredicted RBP17.75■□□□□ 0.43
CTNS-203ENST00000399306 PSMD3O43242 534 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 TM7SF2O76062 418 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 NDST3O95803 873 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 PDHA1P08559 390 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 HNRNPA2B1P22626 353 aaKnown RBP17.75■□□□□ 0.43
CTNS-203ENST00000399306 VIPR1P32241 457 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 ACTN2P35609 894 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 EPHB1P54762 984 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 CSRP2Q16527 193 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 CCDC70Q6NSX1 233 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 NYAP1Q6ZVC0 841 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 CBARPQ8N350 705 aaPredicted RBP17.75■□□□□ 0.43
CTNS-203ENST00000399306 DEFB119Q8N690 84 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 PRELID2Q8N945 189 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 FAM71DQ8N9W8 422 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 C1orf54Q8WWF1 131 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 PIGKQ92643 395 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 SKA1Q96BD8 255 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 C10orf88Q9H8K7 445 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 FEZ2Q9UHY8 353 aaPredicted RBP17.75■□□□□ 0.43
CTNS-203ENST00000399306 EIF2B4Q9UI10 523 aaKnown RBP17.75■□□□□ 0.43
CTNS-203ENST00000399306 CHKBQ9Y259 395 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 HS3ST3A1Q9Y663 406 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 ZNF292O60281 2723 aa17.75■□□□□ 0.43
CTNS-203ENST00000399306 LRRK1Q38SD2 2015 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 CAPN8A6NHC0 703 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 ERI2A8K979 691 aaKnown RBP17.74■□□□□ 0.43
CTNS-203ENST00000399306 HLA-DPA1P20036 260 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 TNNT3P45378 269 aaPredicted RBP17.74■□□□□ 0.43
CTNS-203ENST00000399306 AFF3P51826 1226 aaKnown RBP17.74■□□□□ 0.43
CTNS-203ENST00000399306 RALGDSQ12967 914 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 SGCGQ13326 291 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 LIPIQ6XZB0 460 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 ARHGEF18Q6ZSZ5 1173 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 ARMCX6Q7L4S7 300 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 ATL2Q8NHH9 583 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 SPATA22Q8NHS9 363 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 CCDC110Q8TBZ0 833 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 IFT43Q96FT9 208 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 OXNAD1Q96HP4 312 aaPredicted RBP17.74■□□□□ 0.43
CTNS-203ENST00000399306 MLPHQ9BV36 600 aaPredicted RBP17.74■□□□□ 0.43
CTNS-203ENST00000399306 ZDHHC5Q9C0B5 715 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 TMEM74BQ9NUR3 256 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 PAK5Q9P286 719 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 B4GALT6Q9UBX8 382 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 WDR87Q6ZQQ6 2873 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 FRYLO94915 3013 aa17.74■□□□□ 0.43
CTNS-203ENST00000399306 KIF2AO00139 706 aaPredicted RBP17.73■□□□□ 0.43
CTNS-203ENST00000399306 GFRA3O60609 400 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 MAGEC1O60732 1142 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 HEXIM1O94992 359 aaKnown RBP17.73■□□□□ 0.43
CTNS-203ENST00000399306 MT-CYBP00156 380 aaPredicted RBP17.73■□□□□ 0.43
CTNS-203ENST00000399306 ELFN1P0C7U0 828 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 AKT2P31751 481 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 FDFT1P37268 417 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 FNTAP49354 379 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 GDF10P55107 478 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 WNT3AP56704 352 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 FAM193AP78312 1265 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 TEAD4Q15561 434 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 QPCTQ16769 361 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 SEL1L3Q68CR1 1132 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 CREG2Q8IUH2 290 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 MFSD2AQ8NA29 543 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 TMEM145Q8NBT3 493 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 SNX19Q92543 992 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 MS4A14Q96JA4 679 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 SERAC1Q96JX3 654 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 MRGPRX2Q96LB1 330 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 EBF2Q9HAK2 575 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 CAPN10Q9HC96 672 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 MAGEE1Q9HCI5 957 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 TM9SF3Q9HD45 589 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.73■□□□□ 0.43
CTNS-203ENST00000399306 GGT7Q9UJ14 662 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 SLC6A14Q9UN76 642 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 ITM2BQ9Y287 266 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 KNL1Q8NG31 2342 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 PLXNA2O75051 1894 aa17.73■□□□□ 0.43
CTNS-203ENST00000399306 IGLON5A6NGN9 336 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 KHNYNO15037 678 aaKnown RBP17.72■□□□□ 0.43
CTNS-203ENST00000399306 VILLO15195 856 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 PMPCBO75439 489 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 FGF1P05230 155 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 C6P13671 934 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 TGM1P22735 817 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 PSMB4P28070 264 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 CASQ1P31415 396 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 LIG3P49916 1009 aa17.72■□□□□ 0.43
CTNS-203ENST00000399306 ARHGEF7Q14155 803 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms