RNA–Protein interactions for RNA: ENST00000398022.6

TM9SF4-202, Transcript of transmembrane 9 superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF4, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-202ENST00000398022 DLGAP4Q9Y2H0 992 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 IFT52Q9Y366 437 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 EMSYQ7Z589 1322 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 LINC01387J3KSC0 135 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CASC3O15234 703 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CACNG3O60359 315 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CFBP00751 764 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PRR35P0CG20 571 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ODC1P11926 461 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ATF2P15336 505 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 NQO1P15559 274 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 MAT2AP31153 395 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 HOXA13P31271 388 aaPredicted RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 VAMP7P51809 220 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SNAPC2Q13487 334 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 MORF4L2Q15014 288 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PHKG1Q16816 387 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 OR52E8Q6IFG1 317 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ZCCHC12Q6PEW1 402 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 DLK2Q6UY11 383 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 MSANTD1Q6ZTZ1 278 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CDR2LQ86X02 465 aaPredicted RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RFX6Q8HWS3 928 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 BBS7Q8IWZ6 715 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CRYGNQ8WXF5 182 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TTC9Q92623 222 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 FOXJ1Q92949 421 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ART4Q93070 314 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 LENG9Q96B70 501 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PHF21AQ96BD5 680 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 KCNC2Q96PR1 638 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CDC6Q99741 560 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PRRX2Q99811 253 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 HSD17B14Q9BPX1 270 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TEKT3Q9BXF9 490 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 KCNH6Q9H252 994 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ECT2Q9H8V3 914 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SNTG1Q9NSN8 517 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TOR4AQ9NXH8 423 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 GIN1Q9NXP7 522 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.63□□□□□ -1.353e-9■■□□□ 12.5
TM9SF4-202ENST00000398022 PCDHGB4Q9UN71 923 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RPTORQ8N122 1335 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TEX51A0A1B0GUA7 166 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SERTM2A0A1B0GWG4 89 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 A0A1W2PRG0 241 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ZBBXA8MT70 800 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TCP11X1B4DZS4 312 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 GNB5O14775 395 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PAPLNO95428 1278 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 ACSL3O95573 720 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 GALTP07902 379 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TCEA1P23193 301 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PRRX1P54821 245 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RBP5P82980 135 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SF3A3Q12874 501 aaKnown RBP eCLIP6.63□□□□□ -1.354e-7■■■□□ 18.3
TM9SF4-202ENST00000398022 DLGAP5Q15398 846 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 KCNA10Q16322 511 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP1B1Q16678 543 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CNPY1Q3B7I2 92 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 CYP2U1Q7Z449 544 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SP8Q8IXZ3 490 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC17A8Q8NDX2 589 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 DEPDC1BQ8WUY9 529 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SYT11Q9BT88 431 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 SLC26A1Q9H2B4 701 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 DMAC2Q9NW81 257 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 TAS2R14Q9NYV8 317 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 GPRC5DQ9NZD1 345 aa6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 RCOR3Q9P2K3 495 aaPredicted RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 DBR1Q9UK59 544 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 PCDHGA9Q9Y5G4 932 aaKnown RBP6.63□□□□□ -1.35
TM9SF4-202ENST00000398022 KIAA1217Q5T5P2 1943 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SIPA1L1O43166 1804 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 A0A087X0M5 115 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 A0A1B0GX30 115 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 GSAPA4D1B5 854 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ZNF98A6NK75 572 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 EML1O00423 815 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SNAP29O95721 258 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ASGR2P07307 311 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SRGAP2CP0DJJ0 459 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 PITPNBP48739 271 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SNRPFP62306 86 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 OCA2Q04671 838 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CCNJQ5T5M9 372 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ADGRF1Q5T601 910 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 LRRC8BQ6P9F7 803 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 LBX2Q6XYB7 198 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TRIM67Q6ZTA4 783 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 MIGA2Q7L4E1 593 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 KBTBD6Q86V97 674 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 ARHGAP24Q8N264 748 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 PPM1KQ8N3J5 372 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 CPSF7Q8N684 471 aaKnown RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 RASSF5Q8WWW0 418 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 FAM122AQ96E09 287 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 SPACA9Q96E40 222 aaPredicted RBP6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 TXLNGQ9NUQ3 528 aa6.62□□□□□ -1.35
TM9SF4-202ENST00000398022 FGFR1OP2Q9NVK5 253 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms