RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 UGT1A5P35504 534 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SCNN1GP51170 649 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 FMO1Q01740 532 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 BROXQ5VW32 411 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 RSBN1Q5VWQ0 802 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 DOK6Q6PKX4 331 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CLVS1Q8IUQ0 354 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 C12orf29Q8N999 325 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 STYXQ8WUJ0 223 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SLC25A14O95258 325 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 IFNA16P05015 189 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 IDH2P48735 452 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CAPSQ13938 189 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 AP5B1Q2VPB7 878 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 MAP1SQ66K74 1059 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 IRGCQ6NXR0 463 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 OFCC1Q8IZS5 231 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ZSCAN18Q8TBC5 510 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 DNAJB14Q8TBM8 379 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 GRIN3AQ8TCU5 1115 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PYDC1Q8WXC3 89 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PRDM12Q9H4Q4 367 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 COLEC10Q9Y6Z7 277 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 COL6A2P12110 1019 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PRKAG1P54619 331 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 USP46P62068 366 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 LPIN1Q14693 890 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CNSTQ6PJW8 725 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 FUKQ8N0W3 1084 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 FAM198AQ9UFP1 575 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 CORO1CQ9ULV4 474 aaPredicted RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 SLC12A4Q9UP95 1085 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 MRPS33Q9Y291 106 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 COQ6Q9Y2Z9 468 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 RWDD3Q9Y3V2 267 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 GPSM3Q9Y4H4 160 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 PCDHB9Q9Y5E1 797 aa5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ATXN2Q99700 1313 aaKnown RBP5.48□□□□□ -1.53
VPS13C-204ENST00000395898 ALOX12P18054 663 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ERCC2P18074 760 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MBTD1Q05BQ5 628 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 SLC25A24Q6NUK1 477 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 GJD3Q8N144 294 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RNF148Q8N7C7 305 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 FBXO6Q9NRD1 293 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LYVE1Q9Y5Y7 322 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 IRF6O14896 467 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TSC22D2O75157 780 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PSMG1O95456 288 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 NTRK1P04629 796 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ZSCAN5DPP0CG00 497 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 HNRNPH3P31942 346 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CTNNB1P35222 781 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 UGT2B15P54855 530 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PPP1R26Q5T8A7 1209 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CCDC185Q8N715 623 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CLDN11O75508 207 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RPL22P35268 128 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CHN2P52757 468 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MANFP55145 182 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RPTNQ6XPR3 784 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 KCNK18Q7Z418 384 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ZC3H7AQ8IWR0 971 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 UXS1Q8NBZ7 420 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ZNF540Q8NDQ6 660 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 SPPL2BQ8TCT7 592 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 DGCR6LQ9BY27 220 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PTPRHQ9HD43 1115 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 GRM6O15303 877 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TLL1O43897 1013 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 FARP2O94887 1054 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LRIG2O94898 1065 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LYPLA2O95372 231 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 CCNYL3P0C7X3 344 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ACTR3P61158 418 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RPL7AP62424 266 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PTPRNQ16849 979 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 LIN54Q6MZP7 749 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 NPNTQ6UXI9 565 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PACS1Q6VY07 963 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 PTGR2Q8N8N7 351 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 FBXO30Q8TB52 745 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 HDAC10Q969S8 669 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 OR52E6Q96RD3 313 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 MUC13Q9H3R2 512 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 AGO1Q9UL18 857 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ASF1AQ9Y294 204 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 FAM237BA0A1B0GVD1 139 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 GTPBP1O00178 669 aaKnown RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ATG13O75143 517 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 TPP2P29144 1249 aaPredicted RBP5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ASMTP46597 345 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 RHBDL3P58872 404 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ENPEPQ07075 957 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 ZSWIM7Q19AV6 140 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 DUPD1Q68J44 220 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 BBS12Q6ZW61 710 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 UBASH3BQ8TF42 649 aa5.47□□□□□ -1.53
VPS13C-204ENST00000395898 COPS8Q99627 209 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms