RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 OR13C4Q8NGS5 318 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 ZNF570Q96NI8 536 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 PANX3Q96QZ0 392 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 LBHD1Q9BQE6 289 aaPredicted RBP25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 RNF38Q9H0F5 515 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 CYP4F11Q9HBI6 524 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 NCKIPSDQ9NZQ3 722 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 CRYL1Q9Y2S2 319 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 CCDC162PA2VCL2 907 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 WISP3O95389 354 aaPredicted RBP25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 GLP2RO95838 553 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 PRDX6P30041 224 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 RALGPS1Q5JS13 557 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 KLC3Q6P597 504 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 RIPOR1Q6ZS17 1223 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 ANKRD33Q7Z3H0 272 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 CFAP61Q8NHU2 1237 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 WBP2Q969T9 261 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 MYRFLQ96LU7 910 aa25.7■■□□□ 1.7
SMARCD3-203ENST00000392811 F8W8V4 182 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 CD3EAPO15446 510 aaKnown RBP25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 RPP40O75818 363 aaKnown RBP25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 JUNP05412 331 aaKnown RBP25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 RHOCP08134 193 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 IRF1P10914 325 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 COX4I1P13073 169 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 KCNA5P22460 613 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 PLD1Q13393 1074 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 TRMT5Q32P41 509 aaKnown RBP25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 TMEM207Q6UWW9 146 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 FRMD7Q6ZUT3 714 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 KDM1BQ8NB78 822 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 SH3RF2Q8TEC5 729 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 CYP4F12Q9HCS2 524 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 OGDHLQ9ULD0 1010 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 YIPF1Q9Y548 306 aa25.69■■□□□ 1.7
SMARCD3-203ENST00000392811 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 ILVBLA1L0T0 632 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 TSPAN3O60637 253 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 PARNO95453 639 aaKnown RBP25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 APLP1P51693 650 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 NSUN2Q08J23 767 aaKnown RBP eCLIP25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 ZNF177Q13360 481 aaPredicted RBP25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 PEX6Q13608 980 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 SEMA3AQ14563 771 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 ACAP2Q15057 778 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 CCDC6Q16204 474 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 ACAD11Q709F0 780 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 PIM3Q86V86 326 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 GPR150Q8NGU9 434 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 EXOC2Q96KP1 924 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 STOML1Q9UBI4 398 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 AGO1Q9UL18 857 aaKnown RBP25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 MTF2Q9Y483 593 aaPredicted RBP25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 COL4A6Q14031 1691 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 C2orf78A6NCI8 922 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 A8MT66 165 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 ZMPSTE24O75844 475 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 RBP1P09455 135 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 SESN3P58005 492 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 C6orf163Q5TEZ5 329 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 FAM45BPQ6NSW5 357 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 SHKBP1Q8TBC3 707 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 FAM45AQ8TCE6 357 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 STON2Q8WXE9 905 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 RSRC1Q96IZ7 334 aaKnown RBP25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 CNDP1Q96KN2 507 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 HSFX1Q9UBD0 423 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 CDYLQ9Y232 598 aa25.68■■□□□ 1.7
SMARCD3-203ENST00000392811 TMEM233B4DJY2 109 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 SOD2P04179 222 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 ALDH1A3P47895 512 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 SCNN1BP51168 640 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 PDCD2Q16342 344 aaPredicted RBP25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 TAF12Q16514 161 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 ADGRF1Q5T601 910 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 GPR158Q5T848 1215 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 MRNIPQ6NTE8 343 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 ZNF549Q6P9A3 640 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 SLC39A5Q6ZMH5 540 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 CHST9Q7L1S5 443 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 DTX3LQ8TDB6 740 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 CCDC126Q96EE4 140 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 KLF16Q9BXK1 252 aaPredicted RBP25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 RIMKLBQ9ULI2 386 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 SSX2IPQ9Y2D8 614 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 SPO11Q9Y5K1 396 aa25.67■■□□□ 1.7
SMARCD3-203ENST00000392811 A0A1B0GVM2 712 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 TCAF2A6NFQ2 919 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 TBX10O75333 385 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 IPO13O94829 963 aaKnown RBP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 SLC4A1P02730 911 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 HNRNPLP14866 589 aaKnown RBP eCLIP25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 CR2P20023 1033 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 ITGAXP20702 1163 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 SERPINB5P36952 375 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 ACTR3P61158 418 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 TLE2Q04725 743 aa25.66■■□□□ 1.7
SMARCD3-203ENST00000392811 CUL3Q13618 768 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms