RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 GSTA4O15217 222 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 CRCPO75575 148 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 SRCP12931 536 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 CHRNA5P30532 468 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 CAPZA1P52907 286 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 KLF10Q13118 480 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 PPIL2Q13356 520 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 STXBP2Q15833 593 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 VPS72Q15906 364 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 DUSP7Q16829 419 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ZIK1Q3SY52 487 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 TIGD7Q6NT04 549 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 TXNDC11Q6PKC3 985 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF720Q7Z2F6 126 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 CAMKK2Q96RR4 588 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 OR51B5Q9H339 312 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 KCNK13Q9HB14 408 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 TNS2Q63HR2 1409 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 KCNN4O15554 427 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 AVILO75366 819 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 CDKL1Q00532 357 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 FAAP100Q0VG06 881 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 PRKD1Q15139 912 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 TRIQKQ629K1 86 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 MZT2BQ6NZ67 158 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF773Q6PK81 442 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 LYSMD3Q7Z3D4 306 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF438Q7Z4V0 828 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 DSELQ8IZU8 1212 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 RP9Q8TA86 221 aaKnown RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 RCN3Q96D15 328 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 DNAJC19Q96DA6 116 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 SAMD11Q96NU1 681 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 NPLQ9BXD5 320 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 ANKHQ9HCJ1 492 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 UFSP2Q9NUQ7 469 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 MALT1Q9UDY8 824 aa11.82□□□□□ -0.52
NPHP4-202ENST00000378161 COL5A2P05997 1499 aaPredicted RBP11.82□□□□□ -0.52
NPHP4-202ENST00000378161 OR6C65A6NJZ3 312 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 DDX3YO15523 660 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 TYK2P29597 1187 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 CD40LGP29965 261 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 COTL1Q14019 142 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 CCNG2Q16589 344 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 IMPG1Q17R60 797 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF284Q2VY69 593 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 Q3C1V9 767 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 INAVAQ3KP66 663 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SHQ1Q6PI26 577 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 OR9Q1Q8NGQ5 310 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 OR8K5Q8NH50 307 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 HDAC11Q96DB2 347 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ENPP5Q9UJA9 477 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ACSL5Q9ULC5 683 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PEX16Q9Y5Y5 336 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF98A6NK75 572 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PRR23D1E9PI22 279 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PIK3R2O00459 728 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 DGAT1O75907 488 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 RAD17O75943 681 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PRR23D2P0DMB1 279 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 RALAP11233 206 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 GRIA3P42263 894 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 CASP2P42575 452 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SPIRE1Q08AE8 756 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 STARD3Q14849 445 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ZNF699Q32M78 642 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FAM45BPQ6NSW5 357 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 BEND5Q7L4P6 421 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FBXO27Q8NI29 283 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FBXO30Q8TB52 745 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 KLHL6Q8WZ60 621 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 TTC9Q92623 222 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PITHD1Q9GZP4 211 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ILKAPQ9H0C8 392 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 RAVER2Q9HCJ3 691 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SMYD2Q9NRG4 433 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 CHST7Q9NS84 486 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SMPD3Q9NY59 655 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 NDUFAF4Q9P032 175 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SHOC2Q9UQ13 582 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FMN2Q9NZ56 1722 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 TRAV6A0A075B6T7 132 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 EFCAB10A6NFE3 127 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SLC9A3R1O14745 358 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 ENTPD3O75355 529 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PIM1P11309 404 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 NAGAP17050 411 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SNRPD2P62316 118 aaKnown RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PSMC6P62333 389 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 IL5RAQ01344 420 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 IL18R1Q13478 541 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 USF2Q15853 346 aaPredicted RBP11.81□□□□□ -0.52
NPHP4-202ENST00000378161 PPIL6Q8IXY8 311 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 FAM71DQ8N9W8 422 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 GLIS3Q8NEA6 775 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 CERKQ8TCT0 537 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 APBB2Q92870 758 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SLC4A9Q96Q91 983 aa11.81□□□□□ -0.52
NPHP4-202ENST00000378161 SH2D3AQ9BRG2 576 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms