RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 LTA4HP09960 611 aaKnown RBP19.32■□□□□ 0.68
PCDHA4-201ENST00000378125 KCNC1P48547 511 aa19.32■□□□□ 0.68
PCDHA4-201ENST00000378125 LCA5Q86VQ0 697 aa19.32■□□□□ 0.68
PCDHA4-201ENST00000378125 SMPD4Q9NXE4 827 aa19.32■□□□□ 0.68
PCDHA4-201ENST00000378125 FNDC3AQ9Y2H6 1198 aaKnown RBP19.32■□□□□ 0.68
PCDHA4-201ENST00000378125 CCDC162PA2VCL2 907 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 C2orf78A6NCI8 922 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 ZNF840PA6NDX5 716 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 PAPSS2O95340 614 aaPredicted RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 SERPINF2P08697 491 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 ATP5F1P24539 256 aaPredicted RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 PIK3R1P27986 724 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 CORO1AP31146 461 aaKnown RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 ACTR3P61158 418 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 AGAP9Q5VTM2 703 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 LRRC74BQ6ZQY2 392 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 ACAD11Q709F0 780 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 SNX32Q86XE0 403 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 HPS6Q86YV9 775 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 LRRC43Q8N309 656 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 RNF38Q9H0F5 515 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 NCKIPSDQ9NZQ3 722 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 CDYLQ9Y232 598 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 LRRC42Q9Y546 428 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 A0A0U1RQS6 177 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 A8MT66 165 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 CBX4O00257 560 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 GLP2RO95838 553 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 SLC11A2P49281 568 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 ASPHQ12797 758 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 PLD1Q13393 1074 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 PTPRRQ15256 657 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 TRMT5Q32P41 509 aaKnown RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 USP41Q3LFD5 358 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 SPOUT1Q5T280 376 aaKnown RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 KDM1BQ8NB78 822 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 SCG3Q8WXD2 468 aaKnown RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 DNAJC9Q8WXX5 260 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 RMDN1Q96DB5 314 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 TMEM175Q9BSA9 504 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 CINPQ9BW66 212 aaPredicted RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 HIPK3Q9H422 1215 aa19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 STX18Q9P2W9 335 aaKnown RBP19.31■□□□□ 0.68
PCDHA4-201ENST00000378125 NVLO15381 856 aaKnown RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 CD3EAPO15446 510 aaKnown RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 HOXA2O43364 376 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 VHLP40337 213 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 KPNA1P52294 538 aaPredicted RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 PRKAA2P54646 552 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 HECTD3Q5T447 861 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 ZNF549Q6P9A3 640 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 PYDC1Q8WXC3 89 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 TTLL2Q9BWV7 592 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 CDH22Q9UJ99 828 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 TRIM17Q9Y577 477 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 H3BNC9 293 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 NUDT2P50583 147 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 OXCT1P55809 520 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 HTRA3P83110 453 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 TBL3Q12788 808 aaKnown RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 SMARCB1Q12824 385 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 TAF12Q16514 161 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 SLC8B1Q6J4K2 584 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 KLC3Q6P597 504 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 LINGO4Q6UY18 593 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 GABPB2Q8TAK5 448 aaPredicted RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 C2orf15Q8WU43 125 aaKnown RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 BHMTQ93088 406 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 FEM1CQ96JP0 617 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 CLSTN3Q9BQT9 956 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 MTRRQ9UBK8 725 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 UBA2Q9UBT2 640 aaPredicted RBP19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 PPM1HQ9ULR3 514 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 ARHGAP26Q9UNA1 814 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 SPO11Q9Y5K1 396 aa19.3■□□□□ 0.68
PCDHA4-201ENST00000378125 F8W8V4 182 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 PITPNM1O00562 1244 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 FGF1P05230 155 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 KPNA2P52292 529 aaKnown RBP19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 PFKPQ01813 784 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 TNK2Q07912 1038 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 NSUN2Q08J23 767 aaKnown RBP eCLIP19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 METTL21CQ5VZV1 264 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 PDCD6IPQ8WUM4 868 aaKnown RBP19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 TSPAN17Q96FV3 270 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 PCDHGC4Q9Y5F7 938 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 STC2O76061 302 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 IPO13O94829 963 aaKnown RBP19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 MT-CO1P00395 513 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 RHOCP08134 193 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 PDHA1P08559 390 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 ANPEPP15144 967 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 HMGA1P17096 107 aaKnown RBP19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 HLA-DPA1P20036 260 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 TUFMP49411 452 aaKnown RBP19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 MYLK4Q86YV6 388 aaPredicted RBP19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 AUTS2Q8WXX7 1259 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 ZNF333Q96JL9 665 aa19.29■□□□□ 0.68
PCDHA4-201ENST00000378125 UBXN10Q96LJ8 280 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms