RNA–Protein interactions for RNA: ENST00000367503.7

SHPRH-202, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 5 BASIC

Gene SHPRH, Length 5,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-202ENST00000367503 TAF1CQ15572 869 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 ANKRD52Q8NB46 1076 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 OR52K1Q8NGK4 314 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 ZNF420Q8TAQ5 688 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 SLC47A1Q96FL8 570 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 CELF6Q96J87 481 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 WDR18Q9BV38 432 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 YTHDF1Q9BYJ9 559 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 TUT1Q9H6E5 874 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 CLN6Q9NWW5 311 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 TOR4AQ9NXH8 423 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 MTRRQ9UBK8 725 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 PTBP2Q9UKA9 531 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 SSR3Q9UNL2 185 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 UBIAD1Q9Y5Z9 338 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 GPR182O15218 404 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 CSDE1O75534 798 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 TRUB2O95900 331 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 SLC7A1P30825 629 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 STAT5AP42229 794 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 RPL7AP62424 266 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 SCRN3Q0VDG4 424 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 MED22Q15528 200 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 GNASQ5JWF2 1037 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 REP15Q6BDI9 236 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 UNC93AQ86WB7 457 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 REPS2Q8NFH8 660 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 NKD2Q969F2 451 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 FBXO32Q969P5 355 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 ADGRE3Q9BY15 652 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 DDX43Q9NXZ2 648 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 ASB3Q9Y575 518 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 A0A0J9YYE9 177 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 LTFP02788 710 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 RPLP2P05387 115 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 UMPSP11172 480 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 MTHFRP42898 656 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 CD97P48960 835 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 FSCN1Q16658 493 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 LSM12Q3MHD2 195 aaKnown RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 SLC27A1Q6PCB7 646 aa12.32□□□□□ -0.44
SHPRH-202ENST00000367503 FBXO16Q8IX29 292 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-202ENST00000367503 K7EPI3 171 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 S100A6P06703 90 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 YBX3P16989 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 PSMB4P28070 264 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 STT3AP46977 705 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 DNASE1L3Q13609 305 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 DDX39BQ13838 428 aaKnown RBP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 NEPROQ6NW34 567 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ADCK2Q7Z695 626 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 GALNT12Q8IXK2 581 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 OR8H3Q8N146 312 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ALG9Q9H6U8 611 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 KLHL1Q9NR64 748 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 GDAP2Q9NXN4 497 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 GSTM1P09488 218 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 PTP4A2Q12974 167 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ECM1Q16610 540 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 TNFAIP8L3Q5GJ75 292 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 MARVELD2Q8N4S9 558 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 PACRGLQ8N7B6 248 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 POP5Q969H6 163 aaKnown RBP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ZNF670Q9BS34 389 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ACTR8Q9H981 624 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ITM2BQ9Y287 266 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 LYPLA2O95372 231 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 IDO1P14902 403 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 NOS2P35228 1153 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 THOP1P52888 689 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 RAB10P61026 200 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 FAM187BQ17R55 369 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 CCDC157Q569K6 752 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 IL23RQ5VWK5 629 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 HSFY1Q96LI6 401 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 SEMA4BQ9NPR2 832 aaPredicted RBP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 SNTG2Q9NY99 539 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 OGDHLQ9ULD0 1010 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 CNOT6Q9ULM6 557 aaKnown RBP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 RABL2BQ9UNT1 228 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ERVK-11Q9UQG0 969 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 ZW10O43264 779 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 PLIN3O60664 434 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 SEC22BO75396 215 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 SERPIND1P05546 499 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 AOC1P19801 751 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 CYP2B6P20813 491 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 MZF1P28698 734 aaPredicted RBP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 RPS7P62081 194 aaKnown RBP12.31□□□□□ -0.44
SHPRH-202ENST00000367503 MFSD14AQ96MC6 490 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 PKP2Q99959 881 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 TBL1YQ9BQ87 522 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 SPATC1LQ9H0A9 340 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 PCDHB12Q9Y5F1 795 aa12.31□□□□□ -0.44
SHPRH-202ENST00000367503 PRRG1O14668 218 aa12.3□□□□□ -0.44
SHPRH-202ENST00000367503 SLC22A2O15244 555 aa12.3□□□□□ -0.44
SHPRH-202ENST00000367503 TCF3P15923 654 aa12.3□□□□□ -0.44
SHPRH-202ENST00000367503 CKMT2P17540 419 aa12.3□□□□□ -0.44
SHPRH-202ENST00000367503 ANXA11P50995 505 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms