RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 SPCS2Q15005 226 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 CCNYL1Q8N7R7 359 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 MFSD9Q8NBP5 474 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 HPSEQ9Y251 543 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 OVOS2A0A0J9YW53 1432 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 OVOS2Q6IE36 1432 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 CNPP09543 421 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PTBP1P26599 531 aaKnown RBP eCLIP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 CRHR1P34998 444 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PTPAQ15257 358 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PIK3R6Q5UE93 754 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 FASTKD5Q7L8L6 764 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZNF367Q7RTV3 350 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 CBWD2Q8IUF1 395 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 SMG8Q8ND04 991 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 DPAGT1Q9H3H5 408 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 SPANXCQ9NY87 97 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RDH8Q9NYR8 311 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZNF169Q14929 603 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RIPOR1Q6ZS17 1223 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 Q8N402 240 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 OR10R2Q8NGX6 335 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 UFD1Q92890 307 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ACSS3Q9H6R3 686 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 FAM105AQ9NUU6 356 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 TSR3Q9UJK0 312 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ANGPT4Q9Y264 503 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 UTYO14607 1347 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 MN1Q10571 1320 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 SPDYE5A6NIY4 337 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 AP1G1O43747 822 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 SLC3A1Q07837 685 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZNF540Q8NDQ6 660 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 TMC2Q8TDI7 906 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 FAM129BQ96TA1 746 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 GNEQ9Y223 722 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 AXIN2Q9Y2T1 843 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PCDHB6Q9Y5E3 794 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RGS14O43566 566 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 IFNA1P01562 189 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 LCN1P31025 176 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 HIST2H2ACQ16777 129 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 HIST2H2AA3Q6FI13 130 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZNF574Q6ZN55 896 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 FAM46DQ8NEK8 389 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 SMAP2Q8WU79 429 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 TMEM8AQ9HCN3 771 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PMF1-BGLAPU3KQ54 211 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 DHPSP49366 369 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 SGCDQ92629 289 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZNF335Q9H4Z2 1342 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 CROCCQ5TZA2 2017 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RPS9P46781 194 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 USP46P62068 366 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RPP38P78345 283 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ESCO2Q56NI9 601 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 AFTPHQ6ULP2 937 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 OR8H3Q8N146 312 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ISOC1Q96CN7 298 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 C8orf48Q96LL4 319 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 GCNAQ96QF7 691 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 GGT7Q9UJ14 662 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 DMRT2Q9Y5R5 561 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RHPN2P1A8MT19 583 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RAB8AP61006 207 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 HSPA14Q0VDF9 509 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ELMOD3Q96FG2 381 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 WRNIP1Q96S55 665 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 CDH22Q9UJ99 828 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 UGGT1Q9NYU2 1555 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 NPIPA5A0A0B4J1W7 369 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 HCN1O60741 890 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 AP2A2O94973 939 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ITGA8P53708 1063 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 OR2B6P58173 313 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 RSU1Q15404 277 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ALG11Q2TAA5 492 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PLA2G4FQ68DD2 849 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 GTF2IRD2BQ6EKJ0 949 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 GTF2IRD2Q86UP8 949 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 NKX2-3Q8TAU0 364 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PHF10Q8WUB8 498 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 TRAF4Q9BUZ4 470 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ADGRE3Q9BY15 652 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 EIF2B3Q9NR50 452 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 GTF2IRD1Q9UHL9 959 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 MAU2Q9Y6X3 613 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZSCAN9O15535 394 aaPredicted RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 FBXO21O94952 628 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 OR56A5P0C7T3 313 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 GNPDA1P46926 289 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZNF404Q494X3 552 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 PIGWQ7Z7B1 504 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ITIH5Q86UX2 942 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZC3H7AQ8IWR0 971 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 FAM126BQ8IXS8 530 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 IZUMO1Q8IYV9 350 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 SLC45A3Q96JT2 553 aa4.69□□□□□ -1.66
SYNE2-203ENST00000357395 ZCCHC2Q9C0B9 1178 aaKnown RBP4.69□□□□□ -1.66
SYNE2-203ENST00000357395 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms