RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ITPKCQ96DU7 683 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 THAP11Q96EK4 314 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 UBXN10Q96LJ8 280 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 C16orf70Q9BSU1 422 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 TDRD1Q9BXT4 1180 aaKnown RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 CCDC68Q9H2F9 335 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 GSTO2Q9H4Y5 243 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 GLOD4Q9HC38 313 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 ANLNQ9NQW6 1124 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 SLC30A1Q9Y6M5 507 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 SMIM28A0A1B0GU29 152 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 IQCA1LA6NCM1 817 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 TMEM221A6NGB7 291 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 TNPO2O14787 897 aaKnown RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 ESRRBO95718 433 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 JUNBP17275 347 aaPredicted RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 EPHX2P34913 555 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 CAPGP40121 348 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 NDUFV1P49821 464 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 SNX17Q15036 470 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 RAB41Q5JT25 222 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 NEPROQ6NW34 567 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 HFE2Q6ZVN8 426 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 PTAR1Q7Z6K3 402 aaPredicted RBP11.47□□□□□ -0.57
CAPN9-202ENST00000354537 OSTM1Q86WC4 334 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 FUNDC1Q8IVP5 155 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 PDGFCQ9NRA1 345 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 TBC1D13Q9NVG8 400 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 ARHGEF38Q9NXL2 777 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 B3GNT3Q9Y2A9 372 aa11.47□□□□□ -0.57
CAPN9-202ENST00000354537 A0A0G2JLL6 359 aaPredicted RBP11.46□□□□□ -0.57
CAPN9-202ENST00000354537 TYW5A2RUC4 315 aaKnown RBP11.46□□□□□ -0.57
CAPN9-202ENST00000354537 H3BMQ9 156 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 I6L893 689 aaPredicted RBP11.46□□□□□ -0.57
CAPN9-202ENST00000354537 FZD9O00144 591 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 GIPC1O14908 333 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 MAGEB3O15480 346 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 RECQL4O94761 1208 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 BAIAP3O94812 1187 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 GRIK2Q13002 908 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 CBX3Q13185 183 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 TUBA3CQ13748 450 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 ZNF460Q14592 562 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 MARCH8Q5T0T0 291 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 OTOP3Q7RTS5 596 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 CATSPER4Q7RTX7 472 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 PRRT2Q7Z6L0 340 aaPredicted RBP11.46□□□□□ -0.57
CAPN9-202ENST00000354537 DDHD1Q8NEL9 900 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 TBC1D15Q8TC07 691 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 COG8Q96MW5 612 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 WDCPQ9H6R7 721 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 MAP10Q9P2G4 905 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 OR12D3Q9UGF7 316 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 GNPTGQ9UJJ9 305 aa11.46□□□□□ -0.57
CAPN9-202ENST00000354537 PAIP2BQ9ULR5 123 aaKnown RBP11.46□□□□□ -0.57
CAPN9-202ENST00000354537 ZNF236Q9UL36 1845 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 TNS1Q9HBL0 1735 aaKnown RBP11.46□□□□□ -0.58
CAPN9-202ENST00000354537 RRN3P2A6NIE6 340 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 SAC3D1A6NKF1 404 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 H0YAE9 185 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 NME4O00746 187 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 GABRDO14764 452 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 NRP1O14786 923 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 MATN3O15232 486 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 ACOX3O15254 700 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 CLOCKO15516 846 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 VPS4BO75351 444 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 BEST1O76090 585 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 PAPSS2O95340 614 aaPredicted RBP11.46□□□□□ -0.58
CAPN9-202ENST00000354537 WISP3O95389 354 aaPredicted RBP11.46□□□□□ -0.58
CAPN9-202ENST00000354537 NELFEP18615 380 aaKnown RBP11.46□□□□□ -0.58
CAPN9-202ENST00000354537 HLCSP50747 726 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 TMBIM6P55061 237 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 PRAMEP78395 509 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 CTBSQ01459 385 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 VGLL4Q14135 290 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 CSHL1Q14406 222 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 GRIK4Q16099 956 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 PPP1R3AQ16821 1122 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 UGT3A2Q3SY77 523 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 ZNF618Q5T7W0 954 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 USP51Q70EK9 711 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 PTRH1Q86Y79 214 aaKnown RBP11.46□□□□□ -0.58
CAPN9-202ENST00000354537 EPHX4Q8IUS5 362 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 LRRC49Q8IUZ0 686 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 SLC15A3Q8IY34 581 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 ADGRG5Q8IZF4 528 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 C19orf60Q96EN9 201 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 EIF2AQ9BY44 585 aaKnown RBP11.46□□□□□ -0.58
CAPN9-202ENST00000354537 ULBP1Q9BZM6 244 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 ARNT2Q9HBZ2 717 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 VTA1Q9NP79 307 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 TMEM45AQ9NWC5 275 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 DDIT4Q9NX09 232 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 UBP1Q9NZI7 540 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 PKD2L2Q9NZM6 624 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 ZNF639Q9UID6 485 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 GJD2Q9UKL4 321 aa11.46□□□□□ -0.58
CAPN9-202ENST00000354537 ITGB1BP2Q9UKP3 347 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms