RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 CD248Q9HCU0 757 aa16.43■□□□□ 0.22
SNED1-202ENST00000342631 PIH1D1Q9NWS0 290 aaKnown RBP16.43■□□□□ 0.22
SNED1-202ENST00000342631 SARDHQ9UL12 918 aa16.43■□□□□ 0.22
SNED1-202ENST00000342631 TCAF1Q9Y4C2 921 aa16.43■□□□□ 0.22
SNED1-202ENST00000342631 ATG2BQ96BY7 2078 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 CAPN8A6NHC0 703 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 UPK3BL1B0FP48 263 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 UPK3BL2E5RIL1 263 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
SNED1-202ENST00000342631 RPS9P46781 194 aaKnown RBP16.42■□□□□ 0.22
SNED1-202ENST00000342631 COPAP53621 1224 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 FZD5Q13467 585 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 MTM1Q13496 603 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 POU6F1Q14863 301 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 FASTKD3Q14CZ7 662 aaKnown RBP16.42■□□□□ 0.22
SNED1-202ENST00000342631 TAF1AQ15573 450 aaPredicted RBP16.42■□□□□ 0.22
SNED1-202ENST00000342631 CST6Q15828 149 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 SYT13Q7L8C5 426 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 TMEM135Q86UB9 458 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 AGGF1Q8N302 714 aaeCLIP16.42■□□□□ 0.22
SNED1-202ENST00000342631 MPP5Q8N3R9 675 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 CLDN23Q96B33 292 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 IER2Q9BTL4 223 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNED1-202ENST00000342631 CHMP2BQ9UQN3 213 aa16.42■□□□□ 0.22
SNED1-202ENST00000342631 C2orf81A6NN90 581 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 USP1O94782 785 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 CYP2A6P11509 494 aaPredicted RBP16.41■□□□□ 0.22
SNED1-202ENST00000342631 SLC8A1P32418 973 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 PHBP35232 272 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 DGKEP52429 567 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 SIGLEC14Q08ET2 396 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 FRG1Q14331 258 aaKnown RBP16.41■□□□□ 0.22
SNED1-202ENST00000342631 STEAP4Q687X5 459 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 CYS1Q717R9 158 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 ZSWIM9Q86XI8 627 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 ANKMY2Q8IV38 441 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.41■□□□□ 0.22
SNED1-202ENST00000342631 PJA1Q8NG27 643 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 BLOC1S5Q8TDH9 187 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 C9orf72Q96LT7 481 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 WDR83Q9BRX9 315 aaKnown RBP16.41■□□□□ 0.22
SNED1-202ENST00000342631 SEMA4AQ9H3S1 761 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 POLMQ9NP87 494 aaPredicted RBP16.41■□□□□ 0.22
SNED1-202ENST00000342631 NINJ2Q9NZG7 142 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 MROH6A6NGR9 719 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 BANF1O75531 89 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 ABHD2P08910 425 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 TIMP2P16035 220 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 ZNF30P17039 623 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 MAGEA9P43362 315 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 PSMD8P48556 350 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 NEK3P51956 506 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 CRADDP78560 199 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 ELP6Q0PNE2 266 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 CRY1Q16526 586 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 SPANXN3Q5MJ09 141 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 KIAA1211LQ6NV74 962 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 ERAP2Q6P179 960 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 ERN2Q76MJ5 926 aaKnown RBP16.41■□□□□ 0.22
SNED1-202ENST00000342631 GLT6D1Q7Z4J2 308 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 TTC7BQ86TV6 843 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 IGDCC3Q8IVU1 814 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 EDAQ92838 391 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 LRRC4CQ9HCJ2 640 aa16.41■□□□□ 0.22
SNED1-202ENST00000342631 MTF2Q9Y483 593 aaPredicted RBP16.41■□□□□ 0.22
SNED1-202ENST00000342631 RIPK2O43353 540 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 LDB2O43679 373 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 PAMP19021 973 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 HNF1BP35680 557 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 RPS14P62263 151 aaKnown RBP16.4■□□□□ 0.22
SNED1-202ENST00000342631 KYNUQ16719 465 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 SKIDA1Q1XH10 827 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 HP1BP3Q5SSJ5 553 aaPredicted RBP16.4■□□□□ 0.22
SNED1-202ENST00000342631 DENND2CQ68D51 928 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 ZNF449Q6P9G9 518 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 FBXL19Q6PCT2 694 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 PARS2Q7L3T8 475 aaKnown RBP16.4■□□□□ 0.22
SNED1-202ENST00000342631 TMPRSS6Q8IU80 811 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 RAVER1Q8IY67 606 aaKnown RBP16.4■□□□□ 0.22
SNED1-202ENST00000342631 STYXQ8WUJ0 223 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 ARRDC3Q96B67 414 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 FOXQ1Q9C009 403 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 CHRAC1Q9NRG0 131 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 ZNF711Q9Y462 761 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 RPS6KL1Q9Y6S9 549 aa16.4■□□□□ 0.22
SNED1-202ENST00000342631 DNTTP04053 509 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 COL9A1P20849 921 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 LPOP22079 712 aaPredicted RBP16.39■□□□□ 0.21
SNED1-202ENST00000342631 PSMA3P25788 255 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 HMGCLP35914 325 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 SEPT6Q14141 434 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 TTC31Q49AM3 519 aaPredicted RBP16.39■□□□□ 0.21
SNED1-202ENST00000342631 ANKRD20A4Q4UJ75 823 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 TSTD2Q5T7W7 516 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 C3orf62Q6ZUJ4 267 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 MDGA1Q8NFP4 955 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 GSDMBQ8TAX9 411 aa16.39■□□□□ 0.21
SNED1-202ENST00000342631 UBLCP1Q8WVY7 318 aaPredicted RBP16.39■□□□□ 0.21
SNED1-202ENST00000342631 FUT8Q9BYC5 575 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms